PDB entry 2xt6

View 2xt6 on RCSB PDB site
Description: crystal structure of mycobacterium smegmatis alpha-ketoglutarate decarboxylase homodimer (orthorhombic form)
Deposited on 2010-10-05, released 2011-06-15
The last revision was dated 2011-10-12, with a file datestamp of 2011-10-07.
Experiment type: XRAY
Resolution: 2.74 Å
R-factor: 0.1874
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2-oxoglutarate decarboxylase
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:246196]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: 2-oxoglutarate decarboxylase
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:246196]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: TPP, MG, CA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2xt6A (A:)
    gmnaslevptatsvraipaklmidnrvvinnhlkrtrggkisfthllgyaivqavkkfpn
    mnrhfavvdgkptaitpahtnlglaidlqgkdgnrslvvaaikrcetmrfgqfiaayedi
    vrrardgkltaedfsgvtisltnpgtlgtvhsvprlmqgqgaiigagameypaefqgase
    eriadlgigklitltstydhriiqgaesgdflrtihqllldddffdeifrelgipyepvr
    wrtdnpdsiedknarvieliaayrnrghlmadidplrldntrfrshpdldvnshgltlwd
    ldrefkvdgfagvqrkklrdilsvlrdaycrhvgveythilepeqqrwiqervetkhdkp
    tvaeqkyilsklnaaeafetflqtkyvgqkrfslegaetvipmmdavidqcaehgldevv
    iamphrgrlnvlanivgkpysqifsefegnlnpsqahgsgdvkyhlgatgtyiqmfgdnd
    ievsltanpshleavdpvleglvrakqdlldtgeegsdnrfsvvplmlhgdaafagqgvv
    aetlnlallrgyrtggtihivvnnqigfttaptdsrsseyctdvakmigapifhvngddp
    eacawvarlavdfrqafkkdvvidmlcyrrrghnegddpsmtqpymydvidtkrgsrkay
    tealigrgdismkeaedalrdyqgqlervfnevrelekheiepsesveadqqipsklata
    vdkamlqrigdahlalpegftvhprvrpvlekrremayegridwafaellalgsliaegk
    lvrlsgqdtqrgtftqrhavivdrktgeeftplqllatnpdgtptggkflvynsalsefa
    avgfeygysvgnpdamvlweaqfgdfvngaqsiidefissgeakwgqlsdvvlllphghe
    gqgpdhtsgrierflqlwaegsmtiampstpanyfhllrrhgkdgiqrplivftpksmlr
    nkaavsdirdfteskfrsvleepmytdgegdrnkvtrllltsgkiyyelaarkakenred
    vaivrieqlaplprrrlaetldrypnvkekfwvqeepanqgawpsfgltlpeilpdhftg
    lkrisrramsapssgsskvhaveqqeildtafg
    

    Sequence, based on observed residues (ATOM records):
    >2xt6A (A:)
    evptatsvraipaklmidnrvvinnhlkrtrggkisfthllgyaivqavkkfpnmnrhfa
    vvdgkptaitpahtnlglaivvaaikrcetmrfgqfiaayedivrrardgkltaedfsgv
    tisltnpmqgqgaiigagameypaefqgaseeriadlgigklitltstydhriiqgaesg
    dflrtihqllldddffdeifrelgipyepvrwrtdnpdsiedknarvieliaayrnrghl
    madidplrldntrfrshpdldvnshgltlwdldrefkvdgfagvqrkklrdilsvlrday
    crhvgveythilepeqqrwiqervetkhdkptvaeqkyilsklnaaeafetflqtkyvgq
    krfslegaetvipmmdavidqcaehgldevviamphrgrlnvlanivgkpysqifsefdv
    kyhlgatgtyiqmfgdndievsltanpshleavdpvleglvrakqdlldtgeegsdnrfs
    vvplmlhgdaafagqgvvaetlnlallrgyrtggtihivvnnqigfttaptdsrsseyct
    dvakmigapifhvngddpeacawvarlavdfrqafkkdvvidmlcyrrrghnegddpsmt
    qpymydvidtkrgsrkaytealigrgdismkeaedalrdyqgqlervfnevrelekhela
    tavdkamlqrigdahlalpegftvhprvrpvlekrremayegridwafaellalgsliae
    gklvrlsgqdtqrgtftqrhavivdrktgeeftplqllatnpdgtptggkflvynsalse
    faavgfeygysvgnpdamvlweaqfgdfvngaqsiidefissgeakwgqlsdvvlllphg
    hegqgpdhtsgrierflqlwaegsmtiampstpanyfhllrrhgkdgiqrplivftpksm
    lrnkaavsdirdfteskfrsvleepmytdgegdrnkvtrllltsgkiyyelaarkakenr
    edvaivrieqlaplprrrlaetldrypnvkekfwvqeepanqgawpsfgltlpeilpdhf
    tglkrisrramsapssgsskvhaveqqeildtafg
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2xt6B (B:)
    gmnaslevptatsvraipaklmidnrvvinnhlkrtrggkisfthllgyaivqavkkfpn
    mnrhfavvdgkptaitpahtnlglaidlqgkdgnrslvvaaikrcetmrfgqfiaayedi
    vrrardgkltaedfsgvtisltnpgtlgtvhsvprlmqgqgaiigagameypaefqgase
    eriadlgigklitltstydhriiqgaesgdflrtihqllldddffdeifrelgipyepvr
    wrtdnpdsiedknarvieliaayrnrghlmadidplrldntrfrshpdldvnshgltlwd
    ldrefkvdgfagvqrkklrdilsvlrdaycrhvgveythilepeqqrwiqervetkhdkp
    tvaeqkyilsklnaaeafetflqtkyvgqkrfslegaetvipmmdavidqcaehgldevv
    iamphrgrlnvlanivgkpysqifsefegnlnpsqahgsgdvkyhlgatgtyiqmfgdnd
    ievsltanpshleavdpvleglvrakqdlldtgeegsdnrfsvvplmlhgdaafagqgvv
    aetlnlallrgyrtggtihivvnnqigfttaptdsrsseyctdvakmigapifhvngddp
    eacawvarlavdfrqafkkdvvidmlcyrrrghnegddpsmtqpymydvidtkrgsrkay
    tealigrgdismkeaedalrdyqgqlervfnevrelekheiepsesveadqqipsklata
    vdkamlqrigdahlalpegftvhprvrpvlekrremayegridwafaellalgsliaegk
    lvrlsgqdtqrgtftqrhavivdrktgeeftplqllatnpdgtptggkflvynsalsefa
    avgfeygysvgnpdamvlweaqfgdfvngaqsiidefissgeakwgqlsdvvlllphghe
    gqgpdhtsgrierflqlwaegsmtiampstpanyfhllrrhgkdgiqrplivftpksmlr
    nkaavsdirdfteskfrsvleepmytdgegdrnkvtrllltsgkiyyelaarkakenred
    vaivrieqlaplprrrlaetldrypnvkekfwvqeepanqgawpsfgltlpeilpdhftg
    lkrisrramsapssgsskvhaveqqeildtafg
    

    Sequence, based on observed residues (ATOM records):
    >2xt6B (B:)
    vraipaklmidnrvvinnhlkrtrggkisfthllgyaivqtnlglavvaaikrcetmrfg
    qfiaayedivrrardgkltaedfsgvtisltigagameseeriadlgigklitltsgaes
    gdflrtihqllldddffdeifrelgipyepvrwrtdnpdsiedknarvieliaayrnrgh
    lmadidplrldntrfrshpdldvnshgltlwdldrefkvdgfagvqrkklrdilsvlrda
    ycrhvgveythilepeqqrwiqervetkhdkptvaeqkyilsklnaaeafetflqtkyvg
    qkrfslegaetvipmmdavidqcaehgldevviamphrgrlnvlanivgkpysqifsdvk
    yhlgatgtyiqmfgdndievsltanpshleavdpvleglvrakqdlldtgeegsdnrfsv
    vplmlhgdaafagqgvvaetlnlallrgyrtggtihivvnnqigfttaptdsrsseyctd
    vakmigapifhvngddpeacawvarlavdfrqafkkdvvidmlcyrrrghnegddpsmtq
    pymydvidtkrgsrkaytealigrgdismkeaedalrdyqgqlervfnevrelatavdka
    mlqrigdahlalpegftvhprvrpvlekrremayegridwafaellalgsliaegklvrl
    sgqdtqrgtftqrhavivdrktgeeftplqllatnpdgtptggkflvynsalsefaavgf
    eygysvgnpdamvlweaqfgdfvngaqsiidefissgeakwgqlsdvvlllphghegqgp
    dhtsgrierflqlwaegsmtiampstpanyfhllrrhgkdgiqrplivftpksmlrnkaa
    vsdirdfteskfrsvleepmytdgegdrnkvtrllltsgkiyyelaarkakenredvaiv
    rieqlaplprrrlaetldrypnvkekfwvqeepanqgawpsfgltlpeilpdhftglkri
    srramsapssgsskvhaveqqeildtafg