PDB entry 2xsd
View 2xsd on RCSB PDB site
Description: crystal structure of the dimeric oct-6 (pou3f1) pou domain bound to palindromic more DNA
Class: transcription/DNA
Keywords: transcription-DNA complex, sox
Deposited on
2010-09-28, released
2010-10-20
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-05-11, with a file datestamp of
2011-05-06.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: 0.1978
AEROSPACI score: 0.44
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 5'-d(*ap*tp*gp*cp*ap*tp*gp*ap*gp*gp*ap)-3'
- Chain 'B':
Compound: 5'-d(*cp*cp*tp*cp*ap*tp*gp*cp*ap*tp*ap)-3'
- Chain 'C':
Compound: pou domain, class 3, transcription factor 1
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2xsdc1, d2xsdc2 - Heterogens: EDO, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2xsdC (C:)
ggehsdedapssddleqfakqfkqrriklgftqadvglalgtlygnvfsqtticrfealq
lsfknmcklkpllnkwleetdsssgsptnldkiaaqgrkrkkrtsievgvkgaleshflk
cpkpsaheitgladslqlekevvrvwfcnrrqkekrmtpaagag
Sequence, based on observed residues (ATOM records): (download)
>2xsdC (C:)
apssddleqfakqfkqrriklgftqadvglalgtlygnvfsqtticrfealqlsfknmck
lkpllnkwleetdsievgvkgaleshflkcpkpsaheitgladslqlekevvrvwfcnrr
qkekrmtp