PDB entry 2xpd

View 2xpd on RCSB PDB site
Description: Reduced Thiol peroxidase (Tpx) from yersinia Pseudotuberculosis
Class: oxidoreductase
Keywords: oxidoreductase, peroxiredoxin, thioredoxin-fold, ros protection
Deposited on 2010-08-26, released 2011-06-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-03-14, with a file datestamp of 2012-03-09.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.225
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Thiol Peroxidase
    Species: Yersinia pseudotuberculosis [TaxId:502800]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2xpda_
  • Chain 'B':
    Compound: Thiol Peroxidase
    Species: Yersinia pseudotuberculosis [TaxId:502800]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2xpdb_
  • Chain 'C':
    Compound: Thiol Peroxidase
    Species: Yersinia pseudotuberculosis [TaxId:502800]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q66A71 (33-199)
      • expression tag (30-32)
    Domains in SCOPe 2.08: d2xpdc1, d2xpdc2
  • Chain 'D':
    Compound: Thiol Peroxidase
    Species: Yersinia pseudotuberculosis [TaxId:502800]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2xpdd_
  • Chain 'E':
    Compound: Thiol Peroxidase
    Species: Yersinia pseudotuberculosis [TaxId:502800]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2xpde_
  • Chain 'F':
    Compound: Thiol Peroxidase
    Species: Yersinia pseudotuberculosis [TaxId:502800]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2xpdf_
  • Heterogens: DTU, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2xpdA (A:)
mhhhhhhgkpipnpllgldstenlyfqgidpftmtqtvhfqgnpvsvagklpqigdkakd
ftlvakdlsdvalssfagkrkvlnifpsidtgvcaasvrkfnqlagelentvvlcissdl
pfaqsrfcgaeglsnvitlstlrgadfkqaygvaitegplagltaravvvldgqdnviys
elvneittepnydaalaalk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xpdA (A:)
tqtvhfqgnpvsvagklpqigdkakdftlvakdlsdvalssfagkrkvlnifpsidtgvc
aasvrkfnqlagelentvvlcissdlpfaqsrfcgaeglsnvitlstlrgadfkqaygva
itegplagltaravvvldgqdnviyselvneittepnydaalaalk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2xpdB (B:)
mhhhhhhgkpipnpllgldstenlyfqgidpftmtqtvhfqgnpvsvagklpqigdkakd
ftlvakdlsdvalssfagkrkvlnifpsidtgvcaasvrkfnqlagelentvvlcissdl
pfaqsrfcgaeglsnvitlstlrgadfkqaygvaitegplagltaravvvldgqdnviys
elvneittepnydaalaalk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xpdB (B:)
mtqtvhfqgnpvsvagklpqigdkakdftlvakdlsdvalssfagkrkvlnifpsidtgv
caasvrkfnqlagelentvvlcissdlpfaqsrfcgaeglsnvitlstlrgadfkqaygv
aitegplagltaravvvldgqdnviyselvneittepnydaalaalk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2xpdC (C:)
mhhhhhhgkpipnpllgldstenlyfqgidpftmtqtvhfqgnpvsvagklpqigdkakd
ftlvakdlsdvalssfagkrkvlnifpsidtgvcaasvrkfnqlagelentvvlcissdl
pfaqsrfcgaeglsnvitlstlrgadfkqaygvaitegplagltaravvvldgqdnviys
elvneittepnydaalaalk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xpdC (C:)
pftmtqtvhfqgnpvsvagklpqigdkakdftlvakdlsdvalssfagkrkvlnifpsid
tgvcaasvrkfnqlagelentvvlcissdlpfaqsrfcgaeglsnvitlstlrgadfkqa
ygvaitegplagltaravvvldgqdnviyselvneittepnydaalaalk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2xpdD (D:)
mhhhhhhgkpipnpllgldstenlyfqgidpftmtqtvhfqgnpvsvagklpqigdkakd
ftlvakdlsdvalssfagkrkvlnifpsidtgvcaasvrkfnqlagelentvvlcissdl
pfaqsrfcgaeglsnvitlstlrgadfkqaygvaitegplagltaravvvldgqdnviys
elvneittepnydaalaalk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xpdD (D:)
mtqtvhfqgnpvsvagklpqigdkakdftlvakdlsdvalssfagkrkvlnifpsidtgv
caasvrkfnqlagelentvvlcissdlpfaqsrfcgaeglsnvitlstlrgadfkqaygv
aitegplagltaravvvldgqdnviyselvneittepnydaalaalk

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2xpdE (E:)
mhhhhhhgkpipnpllgldstenlyfqgidpftmtqtvhfqgnpvsvagklpqigdkakd
ftlvakdlsdvalssfagkrkvlnifpsidtgvcaasvrkfnqlagelentvvlcissdl
pfaqsrfcgaeglsnvitlstlrgadfkqaygvaitegplagltaravvvldgqdnviys
elvneittepnydaalaalk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xpdE (E:)
mtqtvhfqgnpvsvagklpqigdkakdftlvakdlsdvalssfagkrkvlnifpsidtgv
caasvrkfnqlagelentvvlcissdlpfaqsrfcgaeglsnvitlstlrgadfkqaygv
aitegplagltaravvvldgqdnviyselvneittepnydaalaalk

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2xpdF (F:)
mhhhhhhgkpipnpllgldstenlyfqgidpftmtqtvhfqgnpvsvagklpqigdkakd
ftlvakdlsdvalssfagkrkvlnifpsidtgvcaasvrkfnqlagelentvvlcissdl
pfaqsrfcgaeglsnvitlstlrgadfkqaygvaitegplagltaravvvldgqdnviys
elvneittepnydaalaalk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xpdF (F:)
tqtvhfqgnpvsvagklpqigdkakdftlvakdlsdvalssfagkrkvlnifpsidtgvc
aasvrkfnqlagelentvvlcissdlpfaqsrfcgaeglsnvitlstlrgadfkqaygva
itegplagltaravvvldgqdnviyselvneittepnydaalaal