PDB entry 2xny

View 2xny on RCSB PDB site
Description: a fragment of streptococcal m1 protein in complex with human fibrinogen
Deposited on 2010-08-06, released 2011-04-13
The last revision was dated 2011-04-20, with a file datestamp of 2011-04-15.
Experiment type: XRAY
Resolution: 7.5 Å
R-factor: 0.423
AEROSPACI score: -0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: fibrinogen alpha chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: fibrinogen beta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Fibrinogen gamma chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: fibrinogen alpha chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: fibrinogen beta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Fibrinogen gamma chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'M':
    Compound: m protein
    Species: STREPTOCOCCUS PYOGENES [TaxId:1314]
    Database cross-references and differences (RAF-indexed):
  • Chain 'N':
    Compound: m protein
    Species: STREPTOCOCCUS PYOGENES [TaxId:1314]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2xnyA (A:)
vsedlrsrievlkrkviekvqhiqllqknvraqlvdmkrlevdidikirscrgscsrala
revdlkdyedqqkqleqviakdllpsr

    Sequence, based on observed residues (ATOM records):
    >2xnyA (A:)
qllqknvraqlvdmkrlevdidikirscrgscsralarevdlkdyedqqkqleqvia

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2xnyB (B:)
dnenvvneysselekhqlyidetvnsniptnlrvlrsilenlrskiqklesdvsaqmeyc
rtpctvscnipvvsgkeceeiirkggetsemyliqpdssvkpyrvycdmntenggwtviq
nrqdgsvdfgrkwdpykqgfgnvatntdgknycglpgeywlgndkisqltrmgptellie
medwkgdkvkahyggftvqneankyqisvnkyrgtagnalmdgasqlmgenrtmtihngm
ffstydrdndgwltsdprkqcskedgggwwynrchaanpngryywggqytwdmakhgtdd
gvvwmnwkgswysmrkmsmkirpffpqq

    Sequence, based on observed residues (ATOM records):
    >2xnyB (B:)
iptnlrvlrsilenlrskiqklesdvsaqmeycrtpctvscnipvvsgkeceeiirkgge
tsemyliqpdssvkpyrvycdmntenggwtviqnrqdgsvdfgrkwdpykqgfgnvatnt
dgknycglpgeywlgndkisqltrmgptelliemedwkgdkvkahyggftvqneankyqi
svnkyrgtagnalmdgasqlmgenrtmtihngmffstydrdndgwltsdprkqcskedgg
gwwynrchaanpngryywggqytwdmakhgtddgvvwmnwkgswysmrkmsmkirpff

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2xnyC (C:)
kmleeimkyeasilthdssirylqeiynsnnqkivnlkekvaqleaqcqepckdtvqihd
itgkdcqdiankgakqsglyfikplkanqqflvyceidgsgngwtvfqkrldgsvdfkkn
wiqykegfghlsptgttefwlgnekihlistqsaipyalrveledwngrtstadyamfkv
gpeadkyrltyayfaggdagdafdgfdfgddpsdkfftshngmqfstwdndndkfegnca
eqdgsgwwmnkchaghlngvyyqggtyskastpngydngiiwatwktrwysmkkttmkii
pfnrltigegqqhhlggak

    Sequence, based on observed residues (ATOM records):
    >2xnyC (C:)
ssirylqeiynsnnqkivnlkekvaqleaqcqepckdtvqihditgkdcqdiankgakqs
glyfikplkanqqflvyceidgsgngwtvfqkrldgsvdfkknwiqykegfghlsptgtt
efwlgnekihlistqsaipyalrveledwngrtstadyamfkvgpeadkyrltyayfagg
dagdafdgfdfgddpsdkfftshngmqfstwdndndkfegncaeqdgsgwwmnkchaghl
ngvyyqggtyskastpngydngiiwatwktrwysmkkttmkiipfnrl

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2xnyD (D:)
vsedlrsrievlkrkviekvqhiqllqknvraqlvdmkrlevdidikirscrgscsrala
revdlkdyedqqkqleqviakdllpsr

    Sequence, based on observed residues (ATOM records):
    >2xnyD (D:)
qllqknvraqlvdmkrlevdidikirscrgscsralarevdlkdyedqqkqleqvia

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2xnyE (E:)
dnenvvneysselekhqlyidetvnsniptnlrvlrsilenlrskiqklesdvsaqmeyc
rtpctvscnipvvsgkeceeiirkggetsemyliqpdssvkpyrvycdmntenggwtviq
nrqdgsvdfgrkwdpykqgfgnvatntdgknycglpgeywlgndkisqltrmgptellie
medwkgdkvkahyggftvqneankyqisvnkyrgtagnalmdgasqlmgenrtmtihngm
ffstydrdndgwltsdprkqcskedgggwwynrchaanpngryywggqytwdmakhgtdd
gvvwmnwkgswysmrkmsmkirpffpqq

    Sequence, based on observed residues (ATOM records):
    >2xnyE (E:)
iptnlrvlrsilenlrskiqklesdvsaqmeycrtpctvscnipvvsgkeceeiirkgge
tsemyliqpdssvkpyrvycdmntenggwtviqnrqdgsvdfgrkwdpykqgfgnvatnt
dgknycglpgeywlgndkisqltrmgptelliemedwkgdkvkahyggftvqneankyqi
svnkyrgtagnalmdgasqlmgenrtmtihngmffstydrdndgwltsdprkqcskedgg
gwwynrchaanpngryywggqytwdmakhgtddgvvwmnwkgswysmrkmsmkirpff

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2xnyF (F:)
kmleeimkyeasilthdssirylqeiynsnnqkivnlkekvaqleaqcqepckdtvqihd
itgkdcqdiankgakqsglyfikplkanqqflvyceidgsgngwtvfqkrldgsvdfkkn
wiqykegfghlsptgttefwlgnekihlistqsaipyalrveledwngrtstadyamfkv
gpeadkyrltyayfaggdagdafdgfdfgddpsdkfftshngmqfstwdndndkfegnca
eqdgsgwwmnkchaghlngvyyqggtyskastpngydngiiwatwktrwysmkkttmkii
pfnrltigegqqhhlggak

    Sequence, based on observed residues (ATOM records):
    >2xnyF (F:)
ssirylqeiynsnnqkivnlkekvaqleaqcqepckdtvqihditgkdcqdiankgakqs
glyfikplkanqqflvyceidgsgngwtvfqkrldgsvdfkknwiqykegfghlsptgtt
efwlgnekihlistqsaipyalrveledwngrtstadyamfkvgpeadkyrltyayfagg
dagdafdgfdfgddpsdkfftshngmqfstwdndndkfegncaeqdgsgwwmnkchaghl
ngvyyqggtyskastpngydngiiwatwktrwysmkkttmkiipfnrl

  • Chain 'M':
    Sequence, based on SEQRES records:
    >2xnyM (M:)
mvngdgnpreviedlaannpaiqnirlrhenkdlkarlenamevagrdfkraeelekakq
aledqrkdletklkelqqdydlakestswdrqrlekhhhhhh

    Sequence, based on observed residues (ATOM records):
    >2xnyM (M:)
kakqaledqrkdletklkelqqdydlakestswdrqr

  • Chain 'N':
    Sequence, based on SEQRES records:
    >2xnyN (N:)
mvngdgnpreviedlaannpaiqnirlrhenkdlkarlenamevagrdfkraeelekakq
aledqrkdletklkelqqdydlakestswdrqrlekhhhhhh

    Sequence, based on observed residues (ATOM records):
    >2xnyN (N:)
aledqrkdletklkelqqdydlakestswdrqrlek