PDB entry 2xnk

View 2xnk on RCSB PDB site
Description: structure and function of the rad9-binding region of the dna damage checkpoint adaptor topbp1
Deposited on 2010-08-03, released 2010-09-01
The last revision was dated 2011-02-16, with a file datestamp of 2011-02-11.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.2079
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA topoisomerase 2-binding protein 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q92547 (2-End)
      • expression tag (0-1)
  • Chain 'B':
    Compound: DNA topoisomerase 2-binding protein 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q92547 (2-End)
      • expression tag (0-1)
  • Chain 'C':
    Compound: DNA topoisomerase 2-binding protein 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q92547 (2-End)
      • expression tag (1)
  • Chain 'D':
    Compound: DNA topoisomerase 2-binding protein 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q92547 (2-End)
      • expression tag (0-1)
  • Heterogens: GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2xnkA (A:)
    gpmsrndkepffvkflkssdnskcffkalesikefqseeylqiiteeealkikendrsly
    icdpfsgvvfdhlkklgcrivgpqvvifcmhhqrcvpraehpvynmvmsdvtisctslek
    ekreevhkyvqmmggrvyrdlnvsvthliagevgskkylvaanlkkpillpswiktlwek
    sqekkitrytdinmedfkcpiflgciicvtglcgldrkevqqltvkhggqymgqlkmnec
    thlivqepkgqkyecakrwnvhcvttqwffdsiekgfcqdesiykteprpea
    

    Sequence, based on observed residues (ATOM records):
    >2xnkA (A:)
    gpmsrndkepffvkflkssdnskcffkalesikefqseeylqiiteeealkikendrsly
    icdpfsgvvfdhlkklgcrivgpqvvifcmhhqrcvpraehpvynmvmsdvtisctslek
    ekreevhkyvqmmggrvyrdlnvsvthliagevgskkylvaanlkkpillpswiktlwek
    sqekkitrytdinmedfkcpiflgciicvtglcgldrkevqqltvkhggqymgqlkmnec
    thlivqepkgqkyecakrwnvhcvttqwffdsiekgfcqdesiykteprpe
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2xnkB (B:)
    gpmsrndkepffvkflkssdnskcffkalesikefqseeylqiiteeealkikendrsly
    icdpfsgvvfdhlkklgcrivgpqvvifcmhhqrcvpraehpvynmvmsdvtisctslek
    ekreevhkyvqmmggrvyrdlnvsvthliagevgskkylvaanlkkpillpswiktlwek
    sqekkitrytdinmedfkcpiflgciicvtglcgldrkevqqltvkhggqymgqlkmnec
    thlivqepkgqkyecakrwnvhcvttqwffdsiekgfcqdesiykteprpea
    

    Sequence, based on observed residues (ATOM records):
    >2xnkB (B:)
    gpmsrndkepffvkflkssdnskcffkalesikefqseeylqiiteeealkikendrsly
    icdpfsgvvfdhlkklgcrivgpqvvifcmhhqrcvpraehpvynmvmsdvtisctslek
    ekreevhkyvqmmggrvyrdlnvsvthliagevgskkylvaanlkkpillpswiktlwek
    sqekkitrytdinmedfkcpiflgciicvtglcgldrkevqqltvkhggqymgqlkmnec
    thlivqepkgqkyecakrwnvhcvttqwffdsiekgfcqdesiykteprp
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2xnkC (C:)
    gpmsrndkepffvkflkssdnskcffkalesikefqseeylqiiteeealkikendrsly
    icdpfsgvvfdhlkklgcrivgpqvvifcmhhqrcvpraehpvynmvmsdvtisctslek
    ekreevhkyvqmmggrvyrdlnvsvthliagevgskkylvaanlkkpillpswiktlwek
    sqekkitrytdinmedfkcpiflgciicvtglcgldrkevqqltvkhggqymgqlkmnec
    thlivqepkgqkyecakrwnvhcvttqwffdsiekgfcqdesiykteprpea
    

    Sequence, based on observed residues (ATOM records):
    >2xnkC (C:)
    pmsrndkepffvkflkssdnskcffkalesikefqseeylqiiteeealkikendrslyi
    cdpfsgvvfdhlkklgcrivgpqvvifcmhhqrcvpraehpvynmvmsdvtisctsleke
    kreevhkyvqmmggrvyrdlnvsvthliagevgskkylvaanlkkpillpswiktlweks
    qekkitrytdinmedfkcpiflgciicvtglcgldrkevqqltvkhggqymgqlkmnect
    hlivqepkgqkyecakrwnvhcvttqwffdsiekgfcqdesiykteprp
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2xnkD (D:)
    gpmsrndkepffvkflkssdnskcffkalesikefqseeylqiiteeealkikendrsly
    icdpfsgvvfdhlkklgcrivgpqvvifcmhhqrcvpraehpvynmvmsdvtisctslek
    ekreevhkyvqmmggrvyrdlnvsvthliagevgskkylvaanlkkpillpswiktlwek
    sqekkitrytdinmedfkcpiflgciicvtglcgldrkevqqltvkhggqymgqlkmnec
    thlivqepkgqkyecakrwnvhcvttqwffdsiekgfcqdesiykteprpea
    

    Sequence, based on observed residues (ATOM records):
    >2xnkD (D:)
    gpmsrndkepffvkflkssdnskcffkalesikefqseeylqiiteeealkikendrsly
    icdpfsgvvfdhlkklgcrivgpqvvifcmhhqrcvpraehpvynmvmsdvtisctslek
    ekreevhkyvqmmggrvyrdlnvsvthliagevgskkylvaanlkkpillpswiktlwek
    sqekkitrytdinmedfkcpiflgciicvtglcgldrkevqqltvkhggqymgqlkmnec
    thlivqepkgqkyecakrwnvhcvttqwffdsiekgfcqdesiykteprp