PDB entry 2xml

View 2xml on RCSB PDB site
Description: Crystal structure of human JMJD2C catalytic domain
Class: oxidoreductase
Keywords: oxidoreductase, transcription regulation, metal binding
Deposited on 2010-07-28, released 2010-09-29
The last revision prior to the SCOPe 2.04 freeze date was dated 2012-12-05, with a file datestamp of 2012-11-30.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: 0.1991
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: lysine-specific demethylase 4c
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2xmla_
  • Chain 'B':
    Compound: lysine-specific demethylase 4c
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2xmlb_
  • Heterogens: OGA, NI, ZN, EDO, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2xmlA (A:)
smevaevesplnpsckimtfrpsmeefrefnkylaymeskgahraglakvippkewkprq
cyddidnllipapiqqmvtgqsglftqyniqkkamtvkefrqlansgkyctpryldyedl
erkywknltfvapiygadingsiydegvdewniarlntvldvveeecgisiegvntpyly
fgmwkttfawhtedmdlysinylhfgepkswyaippehgkrlerlaqgffpsssqgcdaf
lrhkmtlispsvlkkygipfdkitqeagefmitfpygyhagfnhgfncaestnfatvrwi
dygkvaklctcrkdmvkismdifvrkfqpdryqlwkqgkdiytidhtk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xmlA (A:)
lnpsckimtfrpsmeefrefnkylaymeskgahraglakvippkewkprqcyddidnlli
papiqqmvtgqsglftqyniqkkamtvkefrqlansgkyctpryldyedlerkywknltf
vapiygadingsiydegvdewniarlntvldvveeecgisiegvntpylyfgmwkttfaw
htedmdlysinylhfgepkswyaippehgkrlerlaqgffpsssqgcdaflrhkmtlisp
svlkkygipfdkitqeagefmitfpygyhagfnhgfncaestnfatvrwidygkvaklct
crkdmvkismdifvrkfqpdryqlwkqgkdiytidhtk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2xmlB (B:)
smevaevesplnpsckimtfrpsmeefrefnkylaymeskgahraglakvippkewkprq
cyddidnllipapiqqmvtgqsglftqyniqkkamtvkefrqlansgkyctpryldyedl
erkywknltfvapiygadingsiydegvdewniarlntvldvveeecgisiegvntpyly
fgmwkttfawhtedmdlysinylhfgepkswyaippehgkrlerlaqgffpsssqgcdaf
lrhkmtlispsvlkkygipfdkitqeagefmitfpygyhagfnhgfncaestnfatvrwi
dygkvaklctcrkdmvkismdifvrkfqpdryqlwkqgkdiytidhtk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xmlB (B:)
lnpsckimtfrpsmeefrefnkylaymeskgahraglakvippkewkprqcyddidnlli
papiqqmvtgqsglftqyniqkkamtvkefrqlansgkyctpryldyedlerkywknltf
vapiygadingsiydegvdewniarlntvldvveeecgisiegvntpylyfgmwkttfaw
htedmdlysinylhfgepkswyaippehgkrlerlaqgffpsssqgcdaflrhkmtlisp
svlkkygipfdkitqeagefmitfpygyhagfnhgfncaestnfatvrwidygkvaklct
crkdmvkismdifvrkfqpdryqlwkqgkdiytidhtk