PDB entry 2xi1

View 2xi1 on RCSB PDB site
Description: crystal structure of the hiv-1 nef sequenced from a patient's sample
Deposited on 2010-06-25, released 2011-08-10
The last revision was dated 2011-11-23, with a file datestamp of 2011-11-18.
Experiment type: XRAY
Resolution: 3.5 Å
R-factor: 0.2268
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nef
    Species: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 (BH5 ISOLATE) [TaxId:11682]
    Database cross-references and differences (RAF-indexed):
    • Uniprot C6KEI3
      • conflict (106-107)
      • conflict (203-204)
  • Chain 'B':
    Compound: nef
    Species: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 (BH5 ISOLATE) [TaxId:11682]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2xi1A (A:)
mggkwskssivgwpairerlrraqpaaerrraqpaaegvgaasqdlgrhgaltssntdtt
nadeeeevgfpvrpqvplrpmtykgavdlsfflkekggleglvysqrekeildlwvyhtq
gyfpdwqcytpgpgvrypltfgwcfklvpvdpgeveeategenncllhpicqhgmdddhr
evlkwkfdshlahthmarelhpeyfknc

    Sequence, based on observed residues (ATOM records):
    >2xi1A (A:)
vplrpmtykgavdlsfflkekggleglvysqrekeildlwvyhtqgyfpdwqcytpgpgv
rypltfgwcfklvpvdevlkwkfdshlahthmarelhpeyf

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2xi1B (B:)
mggkwskssivgwpairerlrraqpaaerrraqpaaegvgaasqdlgrhgaltssntdtt
nadeeeevgfpvrpqvplrpmtykgavdlsfflkekggleglvysqkrkeildlwvyhtq
gyfpdwqcytpgpgvrypltfgwcfklvpvdpgeveeategenncllhpicqhgmdddhr
evlkwkfdshlahthmarelhpefyknc

    Sequence, based on observed residues (ATOM records):
    >2xi1B (B:)
vplrpmtykgavdlsfflkekggleglvysqkrkeildlwvyhtqgyfpdwqcytpgpgv
rypltfgwcfklvpvevlkwkfdshlahthmarelhpefy