PDB entry 2xfc

View 2xfc on RCSB PDB site
Description: chikungunya e1 e2 envelope glycoproteins fitted in semliki forest virus cryo-em map
Deposited on 2010-05-21, released 2010-11-24
The last revision was dated 2019-10-23, with a file datestamp of 2019-10-18.
Experiment type: EM
Resolution: 9 Å
R-factor: N/A
AEROSPACI score: -0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: e1 envelope glycoprotein
    Species: CHIKUNGUNYA VIRUS [TaxId:37124]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: e2 envelope glycoprotein
    Species: CHIKUNGUNYA VIRUS [TaxId:37124]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: e1 envelope glycoprotein
    Species: CHIKUNGUNYA VIRUS [TaxId:37124]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: e2 envelope glycoprotein
    Species: CHIKUNGUNYA VIRUS [TaxId:37124]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: e1 envelope glycoprotein
    Species: CHIKUNGUNYA VIRUS [TaxId:37124]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: e2 envelope glycoprotein
    Species: CHIKUNGUNYA VIRUS [TaxId:37124]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: e1 envelope glycoprotein
    Species: CHIKUNGUNYA VIRUS [TaxId:37124]
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: e2 envelope glycoprotein
    Species: CHIKUNGUNYA VIRUS [TaxId:37124]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2xfcA (A:)
yehvtvipntvgvpyktlvnrpgyspmvlemellsvtleptlsldyitceyktvipspyv
kccgtaeckdknlpdysckvftgvypfmwggaycfcdaentqlseahveksescktefas
ayrahtasasaklrvlyqgnnitvtayangdhavtvkdakfivgpmssawtpfdnkivvy
kgdvynmdyppfgagrpgqfgdiqsrtpeskdvyantqlvlqrpaagtvhvpysqapsgf
kywlkergaslqhtapfgcqiatnpvravncavgnmpisidipeaaftrvvdapsltdms
cevpacthssdfggvaiikyaaskkgkcavhsmtnavtireaeievegnsqlqisfstal
asaefrvqvcstqvhcaaechppkdhivnypashttlgvqdisatamswvqkitggvglv
vavaalilivvlcvsfsrh

    Sequence, based on observed residues (ATOM records):
    >2xfcA (A:)
yehvtvipntvgvpyktlvnrpgyspmvlemellsvtleptlsldyitceyktvipspyv
kccgtaeckdknlpdysckvftgvypfmwggaycfcdaentqlseahveksescktefas
ayrahtasasaklrvlyqgnnitvtayangdhavtvkdakfivgpmssawtpfdnkivvy
kgdvynmdyppfgagrpgqfgdiqsrtpeskdvyantqlvlqrpaagtvhvpysqapsgf
kywlkergaslqhtapfgcqiatnpvravncavgnmpisidipeaaftrvvdapsltdms
cevpacthssdfggvaiikyaaskkgkcavhsmtnavtireaeievegnsqlqisfstal
asaefrvqvcstqvhcaaechppkdhivnyp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2xfcB (B:)
stkdnfnvykatrpylahcpdcgeghschspvalerirneatdgtlkiqvslqigiktdd
shdwtklrymdnhmpadaeraglfvrtsapctitgtmghfilarcpkgetltvgftdsrk
ishscthpfhhdppvigrekfhsrpqhgkelpcstyvqstaatteeievhmppdtpdrtl
msqqsgnvkitvngqtvrykcncggsnegltttdkvinnckvdqchaavtnhkkwqynsp
lvprnaelgdrkgkihipfplanvtcrvpkarnptvtygknqvimllypdhptllsyrnm
geepnyqeewvmhkkevvltvpteglevtwgnnepykywpqlstngtahghpheiilyyy
elyptmtvvvvsvatfillsmvgmaagmcmcarrrcitpyeltpgatvpfllsliccirt
aka

    Sequence, based on observed residues (ATOM records):
    >2xfcB (B:)
vykatrpylahcpdcgeghschspvalerirneatdgtlkiqvslqigiktddshdwtkl
rymdnhmpadaeraglfvrtsapctitgtmghfilarcpkgetltvgftdsrkishscth
pfhhdppvigrekfhsrpqhgkelpcstyvqstaatteeievhmppdtpdrtlmsqqsgn
vkitvngqtvrykcncggsnegltttdkvinnckvdqchaavtnhkkwqynsplvprnae
lgdrkgkihipfplanvtcrvpkarnptvtygknqvimllypdhptllsyrngeepnyqe
ewvmhkkevvltvpteglevtwgnnepykywpqls

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2xfcD (D:)
yehvtvipntvgvpyktlvnrpgyspmvlemellsvtleptlsldyitceyktvipspyv
kccgtaeckdknlpdysckvftgvypfmwggaycfcdaentqlseahveksescktefas
ayrahtasasaklrvlyqgnnitvtayangdhavtvkdakfivgpmssawtpfdnkivvy
kgdvynmdyppfgagrpgqfgdiqsrtpeskdvyantqlvlqrpaagtvhvpysqapsgf
kywlkergaslqhtapfgcqiatnpvravncavgnmpisidipeaaftrvvdapsltdms
cevpacthssdfggvaiikyaaskkgkcavhsmtnavtireaeievegnsqlqisfstal
asaefrvqvcstqvhcaaechppkdhivnypashttlgvqdisatamswvqkitggvglv
vavaalilivvlcvsfsrh

    Sequence, based on observed residues (ATOM records):
    >2xfcD (D:)
yehvtvipntvgvpyktlvnrpgyspmvlemellsvtleptlsldyitceyktvipspyv
kccgtaeckdknlpdysckvftgvypfmwggaycfcdaentqlseahveksescktefas
ayrahtasasaklrvlyqgnnitvtayangdhavtvkdakfivgpmssawtpfdnkivvy
kgdvynmdyppfgagrpgqfgdiqsrtpeskdvyantqlvlqrpaagtvhvpysqapsgf
kywlkergaslqhtapfgcqiatnpvravncavgnmpisidipeaaftrvvdapsltdms
cevpacthssdfggvaiikyaaskkgkcavhsmtnavtireaeievegnsqlqisfstal
asaefrvqvcstqvhcaaechppkdhivnyp

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2xfcE (E:)
stkdnfnvykatrpylahcpdcgeghschspvalerirneatdgtlkiqvslqigiktdd
shdwtklrymdnhmpadaeraglfvrtsapctitgtmghfilarcpkgetltvgftdsrk
ishscthpfhhdppvigrekfhsrpqhgkelpcstyvqstaatteeievhmppdtpdrtl
msqqsgnvkitvngqtvrykcncggsnegltttdkvinnckvdqchaavtnhkkwqynsp
lvprnaelgdrkgkihipfplanvtcrvpkarnptvtygknqvimllypdhptllsyrnm
geepnyqeewvmhkkevvltvpteglevtwgnnepykywpqlstngtahghpheiilyyy
elyptmtvvvvsvatfillsmvgmaagmcmcarrrcitpyeltpgatvpfllsliccirt
aka

    Sequence, based on observed residues (ATOM records):
    >2xfcE (E:)
vykatrpylahcpdcgeghschspvalerirneatdgtlkiqvslqigiktddshdwtkl
rymdnhmpadaeraglfvrtsapctitgtmghfilarcpkgetltvgftdsrkishscth
pfhhdppvigrekfhsrpqhgkelpcstyvqstaatteeievhmppdtpdrtlmsqqsgn
vkitvngqtvrykcncggsnegltttdkvinnckvdqchaavtnhkkwqynsplvprnae
lgdrkgkihipfplanvtcrvpkarnptvtygknqvimllypdhptllsyrngeepnyqe
ewvmhkkevvltvpteglevtwgnnepykywpqls

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2xfcF (F:)
yehvtvipntvgvpyktlvnrpgyspmvlemellsvtleptlsldyitceyktvipspyv
kccgtaeckdknlpdysckvftgvypfmwggaycfcdaentqlseahveksescktefas
ayrahtasasaklrvlyqgnnitvtayangdhavtvkdakfivgpmssawtpfdnkivvy
kgdvynmdyppfgagrpgqfgdiqsrtpeskdvyantqlvlqrpaagtvhvpysqapsgf
kywlkergaslqhtapfgcqiatnpvravncavgnmpisidipeaaftrvvdapsltdms
cevpacthssdfggvaiikyaaskkgkcavhsmtnavtireaeievegnsqlqisfstal
asaefrvqvcstqvhcaaechppkdhivnypashttlgvqdisatamswvqkitggvglv
vavaalilivvlcvsfsrh

    Sequence, based on observed residues (ATOM records):
    >2xfcF (F:)
yehvtvipntvgvpyktlvnrpgyspmvlemellsvtleptlsldyitceyktvipspyv
kccgtaeckdknlpdysckvftgvypfmwggaycfcdaentqlseahveksescktefas
ayrahtasasaklrvlyqgnnitvtayangdhavtvkdakfivgpmssawtpfdnkivvy
kgdvynmdyppfgagrpgqfgdiqsrtpeskdvyantqlvlqrpaagtvhvpysqapsgf
kywlkergaslqhtapfgcqiatnpvravncavgnmpisidipeaaftrvvdapsltdms
cevpacthssdfggvaiikyaaskkgkcavhsmtnavtireaeievegnsqlqisfstal
asaefrvqvcstqvhcaaechppkdhivnyp

  • Chain 'G':
    Sequence, based on SEQRES records:
    >2xfcG (G:)
stkdnfnvykatrpylahcpdcgeghschspvalerirneatdgtlkiqvslqigiktdd
shdwtklrymdnhmpadaeraglfvrtsapctitgtmghfilarcpkgetltvgftdsrk
ishscthpfhhdppvigrekfhsrpqhgkelpcstyvqstaatteeievhmppdtpdrtl
msqqsgnvkitvngqtvrykcncggsnegltttdkvinnckvdqchaavtnhkkwqynsp
lvprnaelgdrkgkihipfplanvtcrvpkarnptvtygknqvimllypdhptllsyrnm
geepnyqeewvmhkkevvltvpteglevtwgnnepykywpqlstngtahghpheiilyyy
elyptmtvvvvsvatfillsmvgmaagmcmcarrrcitpyeltpgatvpfllsliccirt
aka

    Sequence, based on observed residues (ATOM records):
    >2xfcG (G:)
vykatrpylahcpdcgeghschspvalerirneatdgtlkiqvslqigiktddshdwtkl
rymdnhmpadaeraglfvrtsapctitgtmghfilarcpkgetltvgftdsrkishscth
pfhhdppvigrekfhsrpqhgkelpcstyvqstaatteeievhmppdtpdrtlmsqqsgn
vkitvngqtvrykcncggsnegltttdkvinnckvdqchaavtnhkkwqynsplvprnae
lgdrkgkihipfplanvtcrvpkarnptvtygknqvimllypdhptllsyrngeepnyqe
ewvmhkkevvltvpteglevtwgnnepykywpqls

  • Chain 'H':
    Sequence, based on SEQRES records:
    >2xfcH (H:)
yehvtvipntvgvpyktlvnrpgyspmvlemellsvtleptlsldyitceyktvipspyv
kccgtaeckdknlpdysckvftgvypfmwggaycfcdaentqlseahveksescktefas
ayrahtasasaklrvlyqgnnitvtayangdhavtvkdakfivgpmssawtpfdnkivvy
kgdvynmdyppfgagrpgqfgdiqsrtpeskdvyantqlvlqrpaagtvhvpysqapsgf
kywlkergaslqhtapfgcqiatnpvravncavgnmpisidipeaaftrvvdapsltdms
cevpacthssdfggvaiikyaaskkgkcavhsmtnavtireaeievegnsqlqisfstal
asaefrvqvcstqvhcaaechppkdhivnypashttlgvqdisatamswvqkitggvglv
vavaalilivvlcvsfsrh

    Sequence, based on observed residues (ATOM records):
    >2xfcH (H:)
yehvtvipntvgvpyktlvnrpgyspmvlemellsvtleptlsldyitceyktvipspyv
kccgtaeckdknlpdysckvftgvypfmwggaycfcdaentqlseahveksescktefas
ayrahtasasaklrvlyqgnnitvtayangdhavtvkdakfivgpmssawtpfdnkivvy
kgdvynmdyppfgagrpgqfgdiqsrtpeskdvyantqlvlqrpaagtvhvpysqapsgf
kywlkergaslqhtapfgcqiatnpvravncavgnmpisidipeaaftrvvdapsltdms
cevpacthssdfggvaiikyaaskkgkcavhsmtnavtireaeievegnsqlqisfstal
asaefrvqvcstqvhcaaechppkdhivnyp

  • Chain 'I':
    Sequence, based on SEQRES records:
    >2xfcI (I:)
stkdnfnvykatrpylahcpdcgeghschspvalerirneatdgtlkiqvslqigiktdd
shdwtklrymdnhmpadaeraglfvrtsapctitgtmghfilarcpkgetltvgftdsrk
ishscthpfhhdppvigrekfhsrpqhgkelpcstyvqstaatteeievhmppdtpdrtl
msqqsgnvkitvngqtvrykcncggsnegltttdkvinnckvdqchaavtnhkkwqynsp
lvprnaelgdrkgkihipfplanvtcrvpkarnptvtygknqvimllypdhptllsyrnm
geepnyqeewvmhkkevvltvpteglevtwgnnepykywpqlstngtahghpheiilyyy
elyptmtvvvvsvatfillsmvgmaagmcmcarrrcitpyeltpgatvpfllsliccirt
aka

    Sequence, based on observed residues (ATOM records):
    >2xfcI (I:)
vykatrpylahcpdcgeghschspvalerirneatdgtlkiqvslqigiktddshdwtkl
rymdnhmpadaeraglfvrtsapctitgtmghfilarcpkgetltvgftdsrkishscth
pfhhdppvigrekfhsrpqhgkelpcstyvqstaatteeievhmppdtpdrtlmsqqsgn
vkitvngqtvrykcncggsnegltttdkvinnckvdqchaavtnhkkwqynsplvprnae
lgdrkgkihipfplanvtcrvpkarnptvtygknqvimllypdhptllsyrngeepnyqe
ewvmhkkevvltvpteglevtwgnnepykywpqls