PDB entry 2xb9
View 2xb9 on RCSB PDB site
Description: structure of helicobacter pylori type II dehydroquinase in complex with inhibitor compound (2r)-2-(4-methoxybenzyl)-3-dehydroquinic acid
Class: lyase
Keywords: lyase, amino acid biosynthesis
Deposited on
2010-04-08, released
2010-09-15
The last revision prior to the SCOPe 2.06 freeze date was dated
2011-07-13, with a file datestamp of
2011-07-08.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: 0.1887
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 3-dehydroquinate dehydratase
Species: Helicobacter pylori [TaxId:210]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2xb9a_ - Chain 'B':
Compound: 3-dehydroquinate dehydratase
Species: Helicobacter pylori [TaxId:210]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2xb9b_ - Chain 'C':
Compound: 3-dehydroquinate dehydratase
Species: Helicobacter pylori [TaxId:210]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2xb9c_ - Heterogens: XNW, CIT, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2xb9A (A:)
mkilviqgpnlnmlghrdprlygmvtldqiheimqtfvkqgnldveleffqtnfegeiid
kiqesvgsdyegiiinpgafshtsiaiadaimlagkpvievhltniqareefrknsytga
acggvimgfgplgynmalmamvnilaemkafqeaqknnpnnpinnqk
Sequence, based on observed residues (ATOM records): (download)
>2xb9A (A:)
mkilviqgpnlnmlghrdprlygmvtldqiheimqtfvkqgnldveleffqtnfegeiid
kiqesvgsdyegiiinpgafshtsiaiadaimlagkpvievhltniqareefrknsytga
acggvimgfgplgynmalmamvnilaemkafqeaqknn
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2xb9B (B:)
mkilviqgpnlnmlghrdprlygmvtldqiheimqtfvkqgnldveleffqtnfegeiid
kiqesvgsdyegiiinpgafshtsiaiadaimlagkpvievhltniqareefrknsytga
acggvimgfgplgynmalmamvnilaemkafqeaqknnpnnpinnqk
Sequence, based on observed residues (ATOM records): (download)
>2xb9B (B:)
mkilviqgpnlnmlghrdprlygmvtldqiheimqtfvkqgnldveleffqtnfegeiid
kiqesvgsdyegiiinpgafshtsiaiadaimlagkpvievhltniqareefrknsytga
acggvimgfgplgynmalmamvnilaemkafqeaqknn
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2xb9C (C:)
mkilviqgpnlnmlghrdprlygmvtldqiheimqtfvkqgnldveleffqtnfegeiid
kiqesvgsdyegiiinpgafshtsiaiadaimlagkpvievhltniqareefrknsytga
acggvimgfgplgynmalmamvnilaemkafqeaqknnpnnpinnqk
Sequence, based on observed residues (ATOM records): (download)
>2xb9C (C:)
mkilviqgpnlnmlghrdprlygmvtldqiheimqtfvkqgnldveleffqtnfegeiid
kiqesvgsdyegiiinpgafshtsiaiadaimlagkpvievhltniqareefrknsytga
acggvimgfgplgynmalmamvnilaemkafqeaqknn