PDB entry 2xav

View 2xav on RCSB PDB site
Description: Ribonucleotide reductase Y731NO2Y and Y730F modified R1 subunit of E. coli
Deposited on 2010-03-31, released 2010-04-14
The last revision was dated 2014-11-05, with a file datestamp of 2014-10-31.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.173
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ribonucleoside-diphosphate reductase 1 subunit alpha
    Species: Escherichia coli K-12 [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00452
      • engineered mutation (729)
  • Chain 'B':
    Compound: ribonucleoside-diphosphate reductase 1 subunit alpha
    Species: Escherichia coli K-12 [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00452
      • engineered mutation (729)
  • Chain 'C':
    Compound: ribonucleoside-diphosphate reductase 1 subunit alpha
    Species: Escherichia coli K-12 [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00452
      • engineered mutation (729)
  • Chain 'D':
    Compound: ribonucleoside-diphosphate reductase 1 subunit beta
    Species: ESCHERICHIA COLI K-12, synthetic [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: ribonucleoside-diphosphate reductase 1 subunit beta
    Species: ESCHERICHIA COLI K-12, synthetic [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: ribonucleoside-diphosphate reductase 1 subunit beta
    Species: ESCHERICHIA COLI K-12, synthetic [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: ribonucleoside-diphosphate reductase 1 subunit beta
    Species: ESCHERICHIA COLI K-12, synthetic [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2xavA (A:)
    mnqnllvtkrdgsterinldkihrvldwaaeglhnvsisqvelrshiqfydgiktsdihe
    tiikaaadlisrdapdyqylaarlaifhlrkkaygqfeppalydhvvkmvemgkydnhll
    edyteeefkqmdtfidhdrdmtfsyaavkqlegkylvqnrvtgeiyesaqflyilvaacl
    fsnypretrlqyvkrfydavstfkislptpimsgvrtptrqfsscvliecgdsldsinat
    ssaivkyvsqragiginagriralgspirggeafhtgcipfykhfqtavkscsqggvrgg
    aatlfypmwhlevesllvlknnrgvegnrvrhmdygvqinklmytrllkgeditlfspsd
    vpglydaffadqeeferlytkyekddsirkqrvkavelfslmmqerastgriyiqnvdhc
    nthspfdpaiapvrqsnlcleialptkplndvndengeialctlsafnlgainnldelee
    lailavraldalldyqdypipaakrgamgrrtlgigvinfayylakhgkrysdgsannlt
    hktfeaiqyyllkasnelakeqgacpwfnettyakgilpidtykkdldtianeplhydwe
    alresikthglrnstlsalmpsetssqisnatngiepprgyvsikaskdgilrqvvpdye
    hlhdayellwempgndgylqlvgimqkfidqsisantnydpsrfpsgkvpmqqllkdllt
    aykfgvktlfyqntrdgaedaqddlvpsiqddgcesgacki
    

    Sequence, based on observed residues (ATOM records):
    >2xavA (A:)
    nllvtkrdgsterinldkihrvldwaaeglhnvsisqvelrshiqfydgiktsdihetii
    kaaadlisrdapdyqylaarlaifhlrkkaygqfeppalydhvvkmvemgkydnhlledy
    teeefkqmdtfidhdrdmtfsyaavkqlegkylvqnrvtgeiyesaqflyilvaaclfsn
    ypretrlqyvkrfydavstfkislptpimsgvrtptrqfsscvliecgdsldsinatssa
    ivkyvsqragiginagriralgspfhtgcipfykhfqtavkscsqggvrggaatlfypmw
    hlevesllvlknnrgvegnrvrhmdygvqinklmytrllkgeditlfspsdvpglydaff
    adqeeferlytkyekddsirkqrvkavelfslmmqerastgriyiqnvdhcnthspfdpa
    iapvrqsnlcleialptkplndvndengeialctlsafnlgainnldeleelailavral
    dalldyqdypipaakrgamgrrtlgigvinfayylakhgkrysdgsannlthktfeaiqy
    yllkasnelakeqgacpwfnettyakgilpidtykkdldtianeplhydwealresikth
    glrnstlsalmpsetssqisnatngiepprgyvsikaskdgilrqvvpdyehlhdayell
    wempgndgylqlvgimqkfidqsisantnydpsrfpsgkvpmqqllkdlltaykfgvktl
    fyqntrdg
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2xavB (B:)
    mnqnllvtkrdgsterinldkihrvldwaaeglhnvsisqvelrshiqfydgiktsdihe
    tiikaaadlisrdapdyqylaarlaifhlrkkaygqfeppalydhvvkmvemgkydnhll
    edyteeefkqmdtfidhdrdmtfsyaavkqlegkylvqnrvtgeiyesaqflyilvaacl
    fsnypretrlqyvkrfydavstfkislptpimsgvrtptrqfsscvliecgdsldsinat
    ssaivkyvsqragiginagriralgspirggeafhtgcipfykhfqtavkscsqggvrgg
    aatlfypmwhlevesllvlknnrgvegnrvrhmdygvqinklmytrllkgeditlfspsd
    vpglydaffadqeeferlytkyekddsirkqrvkavelfslmmqerastgriyiqnvdhc
    nthspfdpaiapvrqsnlcleialptkplndvndengeialctlsafnlgainnldelee
    lailavraldalldyqdypipaakrgamgrrtlgigvinfayylakhgkrysdgsannlt
    hktfeaiqyyllkasnelakeqgacpwfnettyakgilpidtykkdldtianeplhydwe
    alresikthglrnstlsalmpsetssqisnatngiepprgyvsikaskdgilrqvvpdye
    hlhdayellwempgndgylqlvgimqkfidqsisantnydpsrfpsgkvpmqqllkdllt
    aykfgvktlfyqntrdgaedaqddlvpsiqddgcesgacki
    

    Sequence, based on observed residues (ATOM records):
    >2xavB (B:)
    nllvtkrdgsterinldkihrvldwaaeglhnvsisqvelrshiqfydgiktsdihetii
    kaaadlisrdapdyqylaarlaifhlrkkaygqfeppalydhvvkmvemgkydnhlledy
    teeefkqmdtfidhdrdmtfsyaavkqlegkylvqnrvtgeiyesaqflyilvaaclfsn
    ypretrlqyvkrfydavstfkislptpimsgvrtptrqfsscvliecgdsldsinatssa
    ivkyvsqragiginagriralgspfhtgcipfykhfqtavkscsqggvrggaatlfypmw
    hlevesllvlknnrgvegnrvrhmdygvqinklmytrllkgeditlfspsdvpglydaff
    adqeeferlytkyekddsirkqrvkavelfslmmqerastgriyiqnvdhcnthspfdpa
    iapvrqsnlcleialptkplndvndengeialctlsafnlgainnldeleelailavral
    dalldyqdypipaakrgamgrrtlgigvinfayylakhgkrysdgsannlthktfeaiqy
    yllkasnelakeqgacpwfnettyakgilpidtykkdldtianeplhydwealresikth
    glrnstlsalmpsetssqisnatngiepprgyvsikaskdgilrqvvpdyehlhdayell
    wempgndgylqlvgimqkfidqsisantnydpsrfpsgkvpmqqllkdlltaykfgvktl
    fyqntrdg
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2xavC (C:)
    mnqnllvtkrdgsterinldkihrvldwaaeglhnvsisqvelrshiqfydgiktsdihe
    tiikaaadlisrdapdyqylaarlaifhlrkkaygqfeppalydhvvkmvemgkydnhll
    edyteeefkqmdtfidhdrdmtfsyaavkqlegkylvqnrvtgeiyesaqflyilvaacl
    fsnypretrlqyvkrfydavstfkislptpimsgvrtptrqfsscvliecgdsldsinat
    ssaivkyvsqragiginagriralgspirggeafhtgcipfykhfqtavkscsqggvrgg
    aatlfypmwhlevesllvlknnrgvegnrvrhmdygvqinklmytrllkgeditlfspsd
    vpglydaffadqeeferlytkyekddsirkqrvkavelfslmmqerastgriyiqnvdhc
    nthspfdpaiapvrqsnlcleialptkplndvndengeialctlsafnlgainnldelee
    lailavraldalldyqdypipaakrgamgrrtlgigvinfayylakhgkrysdgsannlt
    hktfeaiqyyllkasnelakeqgacpwfnettyakgilpidtykkdldtianeplhydwe
    alresikthglrnstlsalmpsetssqisnatngiepprgyvsikaskdgilrqvvpdye
    hlhdayellwempgndgylqlvgimqkfidqsisantnydpsrfpsgkvpmqqllkdllt
    aykfgvktlfyqntrdgaedaqddlvpsiqddgcesgacki
    

    Sequence, based on observed residues (ATOM records):
    >2xavC (C:)
    nllvtkrdgsterinldkihrvldwaaeglhnvsisqvelrshiqfydgiktsdihetii
    kaaadlisrdapdyqylaarlaifhlrkkaygqfeppalydhvvkmvemgkydnhlledy
    teeefkqmdtfidhdrdmtfsyaavkqlegkylvqnrvtgeiyesaqflyilvaaclfsn
    ypretrlqyvkrfydavstfkislptpimsgvrtptrqfsscvliecgdsldsinatssa
    ivkyvsqragiginagriralgspfhtgcipfykhfqtavkscsqggvrggaatlfypmw
    hlevesllvlknnrgvegnrvrhmdygvqinklmytrllkgeditlfspsdvpglydaff
    adqeeferlytkyekddsirkqrvkavelfslmmqerastgriyiqnvdhcnthspfdpa
    iapvrqsnlcleialptkplndvndengeialctlsafnlgainnldeleelailavral
    dalldyqdypipaakrgamgrrtlgigvinfayylakhgkrysdgsannlthktfeaiqy
    yllkasnelakeqgacpwfnettyakgilpidtykkdldtianeplhydwealresikth
    glrnstlsalmpsetssqisnatngiepprgyvsikaskdgilrqvvpdyehlhdayell
    wempgndgylqlvgimqkfidqsisantnydpsrfpsgkvpmqqllkdlltaykfgvktl
    fyqntrdg
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2xavD (D:)
    ylvgqidsevdtddlsnfql
    

    Sequence, based on observed residues (ATOM records):
    >2xavD (D:)
    qidsevdtddlsnfql
    

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2xavE (E:)
    ylvgqidsevdtddlsnfql
    

    Sequence, based on observed residues (ATOM records):
    >2xavE (E:)
    qidsevdtddlsnfql
    

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2xavF (F:)
    ylvgqidsevdtddlsnfql
    

    Sequence, based on observed residues (ATOM records):
    >2xavF (F:)
    qidsevdtddlsnfql
    

  • Chain 'P':
    Sequence, based on SEQRES records:
    >2xavP (P:)
    ylvgqidsevdtddlsnfql
    

    Sequence, based on observed residues (ATOM records):
    >2xavP (P:)
    ylv