PDB entry 2x7r
View 2x7r on RCSB PDB site
Description: crystal structure of a late fusion intermediate of hiv-1 gp41
Deposited on
2010-03-03, released
2010-05-26
The last revision was dated
2010-05-26, with a file datestamp of
2010-05-21.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.1788
AEROSPACI score: 0.44
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Transmembrane protein gp41
Species: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 LW12.3 ISOLATE [TaxId:82834]
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Transmembrane protein gp41
Species: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 LW12.3 ISOLATE [TaxId:82834]
Database cross-references and differences (RAF-indexed):
- PDB 2X7R (Start-7)
- Uniprot P04578 (8-End)
- Chain 'C':
Compound: Transmembrane protein gp41
Species: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 LW12.3 ISOLATE [TaxId:82834]
Database cross-references and differences (RAF-indexed):
- PDB 2X7R (Start-7)
- Uniprot P04578 (8-End)
- Chain 'D':
Compound: Transmembrane protein gp41
Species: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 LW12.3 ISOLATE [TaxId:82834]
Database cross-references and differences (RAF-indexed):
- PDB 2X7R
- Uniprot P04578 (Start-61)
- Chain 'E':
Compound: Transmembrane protein gp41
Species: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 LW12.3 ISOLATE [TaxId:82834]
Database cross-references and differences (RAF-indexed):
- PDB 2X7R (Start-7)
- Uniprot P04578 (8-End)
- Chain 'N':
Compound: Transmembrane protein gp41
Species: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 LW12.3 ISOLATE [TaxId:82834]
Database cross-references and differences (RAF-indexed):
- PDB 2X7R
- Uniprot P04578 (Start-61)
- Heterogens: NA, CL, HOH
PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.
- Chain 'A':
Sequence, based on SEQRES records:
>2x7rA (A:)
gamddddkstmgaasmtltvqarqllsgivqqqnnllraieaqqhllqltvwgikqlqar
il
Sequence, based on observed residues (ATOM records):
>2x7rA (A:)
rqllsgivqqqnnllraieaqqhllqltvwgikqlqari
- Chain 'B':
Sequence, based on SEQRES records:
>2x7rB (B:)
gamddddkmewdreinnytslihslieesqnqqekneqelleldkwaslwnwfnitnwlw
yik
Sequence, based on observed residues (ATOM records):
>2x7rB (B:)
mddddkmewdreinnytslihslieesqnqqekneqelleldk
- Chain 'C':
Sequence, based on SEQRES records:
>2x7rC (C:)
gamddddkmewdreinnytslihslieesqnqqekneqelleldkwaslwnwfnitnwlw
yik
Sequence, based on observed residues (ATOM records):
>2x7rC (C:)
ddddkmewdreinnytslihslieesqnqqekneqelleldkwaslwnwfnitnwlwy
- Chain 'D':
Sequence, based on SEQRES records:
>2x7rD (D:)
gamddddkstmgaasmtltvqarqllsgivqqqnnllraieaqqhllqltvwgikqlqar
il
Sequence, based on observed residues (ATOM records):
>2x7rD (D:)
smtltvqarqllsgivqqqnnllraieaqqhllqltvwgikqlqaril
- Chain 'E':
Sequence, based on SEQRES records:
>2x7rE (E:)
gamddddkmewdreinnytslihslieesqnqqekneqelleldkwaslwnwfnitnwlw
yik
Sequence, based on observed residues (ATOM records):
>2x7rE (E:)
ddddkmewdreinnytslihslieesqnqqekneqelleldkwaslwnwfnitn
- Chain 'N':
Sequence, based on SEQRES records:
>2x7rN (N:)
gamddddkstmgaasmtltvqarqllsgivqqqnnllraieaqqhllqltvwgikqlqar
il
Sequence, based on observed residues (ATOM records):
>2x7rN (N:)
gaasmtltvqarqllsgivqqqnnllraieaqqhllqltvwgikqlqaril