PDB entry 2x78

View 2x78 on RCSB PDB site
Description: Human foamy virus integrase - catalytic core.
Deposited on 2010-02-24, released 2010-08-11
The last revision was dated 2012-04-18, with a file datestamp of 2012-04-13.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.21485
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: integrase
    Species: HUMAN SPUMARETROVIRUS [TaxId:11963]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P14350
      • see remark 999 (70)
  • Chain 'B':
    Compound: integrase
    Species: HUMAN SPUMARETROVIRUS [TaxId:11963]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P14350
      • see remark 999 (70)
  • Chain 'C':
    Compound: integrase
    Species: HUMAN SPUMARETROVIRUS [TaxId:11963]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P14350
      • see remark 999 (70)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2x78A (A:)
gpilrpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvks
lnvltsiaiprvihsdqgaaftsstfaewakergihlefstpyhpqsgskverknsdikr
lltkllvgrptkwydllpvvqlalnntyspvlkytphqllfgidsntpfanqdtldltre
eelsllqeirtslyhpstpp

    Sequence, based on observed residues (ATOM records):
    >2x78A (A:)
qkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiai
prvihsdqgaaftsstfaewakergihlefstskverknsdikrlltkllvgrptkwydl
lpvvqlalnntyspvlkytphqllfgidtldltreeelsllqeirtslyhp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2x78B (B:)
gpilrpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvks
lnvltsiaiprvihsdqgaaftsstfaewakergihlefstpyhpqsgskverknsdikr
lltkllvgrptkwydllpvvqlalnntyspvlkytphqllfgidsntpfanqdtldltre
eelsllqeirtslyhpstpp

    Sequence, based on observed residues (ATOM records):
    >2x78B (B:)
pqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsia
iprvihsdqgaaftsstfaewakergihlefstpkverknsdikrlltkllvgrptkwyd
llpvvqlalnntyspvlkytphqllfgipfanqdtldltreeelsllqeirtslyh

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2x78C (C:)
gpilrpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvks
lnvltsiaiprvihsdqgaaftsstfaewakergihlefstpyhpqsgskverknsdikr
lltkllvgrptkwydllpvvqlalnntyspvlkytphqllfgidsntpfanqdtldltre
eelsllqeirtslyhpstpp

    Sequence, based on observed residues (ATOM records):
    >2x78C (C:)
pqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsia
iprvihsdqgaaftsstfaewakergihlefstsgskverknsdikrlltkllvgrptkw
ydllpvvqlalnntyspvlkytphqllfgidsntpfanqdtldltreeelsllqeirtsl
yhp