PDB entry 2x5k

View 2x5k on RCSB PDB site
Description: structure of an active site mutant of the d-erythrose-4-phosphate dehydrogenase from e. coli
Deposited on 2010-02-10, released 2011-02-16
The last revision was dated 2011-02-16, with a file datestamp of 2011-02-11.
Experiment type: XRAY
Resolution: 2.37 Å
R-factor: 0.16656
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'O':
    Compound: d-erythrose-4-phosphate dehydrogenase
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A9B6 (Start-338)
      • engineered mutation (154)
      • engineered mutation (158)
  • Chain 'P':
    Compound: d-erythrose-4-phosphate dehydrogenase
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A9B6 (Start-338)
      • engineered mutation (154)
      • engineered mutation (158)
  • Chain 'Q':
    Compound: d-erythrose-4-phosphate dehydrogenase
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A9B6
      • engineered mutation (154)
      • engineered mutation (158)
  • Chain 'R':
    Compound: d-erythrose-4-phosphate dehydrogenase
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A9B6
      • engineered mutation (154)
      • engineered mutation (158)
  • Heterogens: GOL, EDO, PG4, CL, PGE, PEG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'O':
    Sequence, based on SEQRES records:
    >2x5kO (O:)
    mtvrvaingfgrigrnvvralyesgrraeitvvaineladaagmahllkydtshgrfawe
    vrqerdqlfvgddairvlherslqslpwrelgvdvvldctgvygsrehgeahiaagakkv
    lfshpgsndldatvvygvnqdqlraehrivsnasattnsiipvikllddaygiesgtvtt
    ihsamhdqqvidayhpdlrrtraasqsiipvdtklaagitrffpqfndrfeaiavrvpti
    nvtaidlsvtvkkpvkanevnlllqkaaqgafhgivdytelplvsvdfnhdphsaivdgt
    qtrvsgahliktlvwcdnewgfanrmldttlamatvafr
    

    Sequence, based on observed residues (ATOM records):
    >2x5kO (O:)
    tvrvaingfgrigrnvvralyesgrraeitvvaineladaagmahllkydtshgrfawev
    rqerdqlfvgddairvlherslqslpwrelgvdvvldctgvygsrehgeahiaagakkvl
    fshpgsndldatvvygvnqdqlraehrivsnasattnsiipvikllddaygiesgtvtti
    hsamhdqqvidlrrtraasqsiipvdtklaagitrffpqfndrfeaiavrvptinvtaid
    lsvtvkkpvkanevnlllqkaaqgafhgivdytelplvsvdfnhdphsaivdgtqtrvsg
    ahliktlvwcdnewgfanrmldttlamatvafr
    

  • Chain 'P':
    Sequence, based on SEQRES records:
    >2x5kP (P:)
    mtvrvaingfgrigrnvvralyesgrraeitvvaineladaagmahllkydtshgrfawe
    vrqerdqlfvgddairvlherslqslpwrelgvdvvldctgvygsrehgeahiaagakkv
    lfshpgsndldatvvygvnqdqlraehrivsnasattnsiipvikllddaygiesgtvtt
    ihsamhdqqvidayhpdlrrtraasqsiipvdtklaagitrffpqfndrfeaiavrvpti
    nvtaidlsvtvkkpvkanevnlllqkaaqgafhgivdytelplvsvdfnhdphsaivdgt
    qtrvsgahliktlvwcdnewgfanrmldttlamatvafr
    

    Sequence, based on observed residues (ATOM records):
    >2x5kP (P:)
    tvrvaingfgrigrnvvralyesgrraeitvvaineladaagmahllkydtshgrfawev
    rqerdqlfvgddairvlherslqslpwrelgvdvvldctgvygsrehgeahiaagakkvl
    fshpgsndldatvvygvnqdqlraehrivsnasattnsiipvikllddaygiesgtvtti
    hsamhdqqvidayhpdlrrtraasqsiipvdtklaagitrffpqfndrfeaiavrvptin
    vtaidlsvtvkkpvkanevnlllqkaaqgafhgivdytelplvsvdfnhdphsaivdgtq
    trvsgahliktlvwcdnewgfanrmldttlamatvafr
    

  • Chain 'Q':
    Sequence, based on SEQRES records:
    >2x5kQ (Q:)
    mtvrvaingfgrigrnvvralyesgrraeitvvaineladaagmahllkydtshgrfawe
    vrqerdqlfvgddairvlherslqslpwrelgvdvvldctgvygsrehgeahiaagakkv
    lfshpgsndldatvvygvnqdqlraehrivsnasattnsiipvikllddaygiesgtvtt
    ihsamhdqqvidayhpdlrrtraasqsiipvdtklaagitrffpqfndrfeaiavrvpti
    nvtaidlsvtvkkpvkanevnlllqkaaqgafhgivdytelplvsvdfnhdphsaivdgt
    qtrvsgahliktlvwcdnewgfanrmldttlamatvafr
    

    Sequence, based on observed residues (ATOM records):
    >2x5kQ (Q:)
    tvrvaingfgrigrnvvralyesgrraeitvvaineladaagmahllkydtshgrfawev
    rqerdqlfvgddairvlherslqslpwrelgvdvvldctgvygsrehgeahiaagakkvl
    fshpgsndldatvvygvnqdqlraehrivsnasattnsiipvikllddaygiesgtvtti
    hsamhdqqvidayhpdlrrtraasqsiipvdtklaagitrffpqfndrfeaiavrvptin
    vtaidlsvtvkkpvkanevnlllqkaaqgafhgivdytelplvsvdfnhdphsaivdgtq
    trvsgahliktlvwcdnewgfanrmldttlamatvaf
    

  • Chain 'R':
    Sequence, based on SEQRES records:
    >2x5kR (R:)
    mtvrvaingfgrigrnvvralyesgrraeitvvaineladaagmahllkydtshgrfawe
    vrqerdqlfvgddairvlherslqslpwrelgvdvvldctgvygsrehgeahiaagakkv
    lfshpgsndldatvvygvnqdqlraehrivsnasattnsiipvikllddaygiesgtvtt
    ihsamhdqqvidayhpdlrrtraasqsiipvdtklaagitrffpqfndrfeaiavrvpti
    nvtaidlsvtvkkpvkanevnlllqkaaqgafhgivdytelplvsvdfnhdphsaivdgt
    qtrvsgahliktlvwcdnewgfanrmldttlamatvafr
    

    Sequence, based on observed residues (ATOM records):
    >2x5kR (R:)
    tvrvaingfgrigrnvvralyesgrraeitvvaineladaagmahllkydtshgrfawev
    rqerdqlfvgddairvlherslqslpwrelgvdvvldctgvygsrehgeahiaagakkvl
    fshpgsndldatvvygvnqdqlraehrivsnasattnsiipvikllddaygiesgtvtti
    hsamhvidayhpdlrrtraasqsiipvdtklaagitrffpqfndrfeaiavrvptinvta
    idlsvtvkkpvkanevnlllqkaaqgafhgivdytelplvsvdfnhdphsaivdgtqtrv
    sgahliktlvwcdnewgfanrmldttlamatvaf