PDB entry 2x5b

View 2x5b on RCSB PDB site
Description: ribonucleotide reductase y730no2y and y731f modified r1 subunit of e. coli
Deposited on 2010-02-08, released 2010-02-23
The last revision was dated 2010-04-14, with a file datestamp of 2010-04-09.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.16148
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ribonucleoside-diphosphate reductase 1 subunit alpha
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00452
      • engineered mutation (730)
  • Chain 'B':
    Compound: ribonucleoside-diphosphate reductase 1 subunit alpha
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00452
      • engineered mutation (730)
  • Chain 'C':
    Compound: ribonucleoside-diphosphate reductase 1 subunit alpha
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00452
      • engineered mutation (730)
  • Chain 'D':
    Compound: ribonucleoside-diphosphate reductase 1 subunit beta
    Species: UNIDENTIFIED, synthetic [TaxId:32644]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: ribonucleoside-diphosphate reductase 1 subunit beta
    Species: UNIDENTIFIED, synthetic [TaxId:32644]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: ribonucleoside-diphosphate reductase 1 subunit beta
    Species: UNIDENTIFIED, synthetic [TaxId:32644]
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: ribonucleoside-diphosphate reductase 1 subunit beta
    Species: UNIDENTIFIED, synthetic [TaxId:32644]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2x5bA (A:)
mnqnllvtkrdgsterinldkihrvldwaaeglhnvsisqvelrshiqfydgiktsdihe
tiikaaadlisrdapdyqylaarlaifhlrkkaygqfeppalydhvvkmvemgkydnhll
edyteeefkqmdtfidhdrdmtfsyaavkqlegkylvqnrvtgeiyesaqflyilvaacl
fsnypretrlqyvkrfydavstfkislptpimsgvrtptrqfsscvliecgdsldsinat
ssaivkyvsqragiginagriralgspirggeafhtgcipfykhfqtavkscsqggvrgg
aatlfypmwhlevesllvlknnrgvegnrvrhmdygvqinklmytrllkgeditlfspsd
vpglydaffadqeeferlytkyekddsirkqrvkavelfslmmqerastgriyiqnvdhc
nthspfdpaiapvrqsnlcleialptkplndvndengeialctlsafnlgainnldelee
lailavraldalldyqdypipaakrgamgrrtlgigvinfayylakhgkrysdgsannlt
hktfeaiqyyllkasnelakeqgacpwfnettyakgilpidtykkdldtianeplhydwe
alresikthglrnstlsalmpsetssqisnatngiepprgyvsikaskdgilrqvvpdye
hlhdayellwempgndgylqlvgimqkfidqsisantnydpsrfpsgkvpmqqllkdllt
aykfgvktlyfqntrdgaedaqddlvpsiqddgcesgacki

    Sequence, based on observed residues (ATOM records):
    >2x5bA (A:)
nllvtkrdgsterinldkihrvldwaaeglhnvsisqvelrshiqfydgiktsdihetii
kaaadlisrdapdyqylaarlaifhlrkkaygqfeppalydhvvkmvemgkydnhlledy
teeefkqmdtfidhdrdmtfsyaavkqlegkylvqnrvtgeiyesaqflyilvaaclfsn
ypretrlqyvkrfydavstfkislptpimsgvrtptrqfsscvliecgdsldsinatssa
ivkyvsqragiginagriralgspirggeafhtgcipfykhfqtavkscsqggvrggaat
lfypmwhlevesllvlknnrgvegnrvrhmdygvqinklmytrllkgeditlfspsdvpg
lydaffadqeeferlytkyekddsirkqrvkavelfslmmqerastgriyiqnvdhcnth
spfdpaiapvrqsnlcleialptkplndvndengeialctlsafnlgainnldeleelai
lavraldalldyqdypipaakrgamgrrtlgigvinfayylakhgkrysdgsannlthkt
feaiqyyllkasnelakeqgacpwfnettyakgilpidtykkdldtianeplhydwealr
esikthglrnstlsalmpsetssqisnatngiepprgyvsikaskdgilrqvvpdyehlh
dayellwempgndgylqlvgimqkfidqsisantnydpsrfpsgkvpmqqllkdlltayk
fgvktlyfqntrdg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2x5bB (B:)
mnqnllvtkrdgsterinldkihrvldwaaeglhnvsisqvelrshiqfydgiktsdihe
tiikaaadlisrdapdyqylaarlaifhlrkkaygqfeppalydhvvkmvemgkydnhll
edyteeefkqmdtfidhdrdmtfsyaavkqlegkylvqnrvtgeiyesaqflyilvaacl
fsnypretrlqyvkrfydavstfkislptpimsgvrtptrqfsscvliecgdsldsinat
ssaivkyvsqragiginagriralgspirggeafhtgcipfykhfqtavkscsqggvrgg
aatlfypmwhlevesllvlknnrgvegnrvrhmdygvqinklmytrllkgeditlfspsd
vpglydaffadqeeferlytkyekddsirkqrvkavelfslmmqerastgriyiqnvdhc
nthspfdpaiapvrqsnlcleialptkplndvndengeialctlsafnlgainnldelee
lailavraldalldyqdypipaakrgamgrrtlgigvinfayylakhgkrysdgsannlt
hktfeaiqyyllkasnelakeqgacpwfnettyakgilpidtykkdldtianeplhydwe
alresikthglrnstlsalmpsetssqisnatngiepprgyvsikaskdgilrqvvpdye
hlhdayellwempgndgylqlvgimqkfidqsisantnydpsrfpsgkvpmqqllkdllt
aykfgvktlyfqntrdgaedaqddlvpsiqddgcesgacki

    Sequence, based on observed residues (ATOM records):
    >2x5bB (B:)
nllvtkrdgsterinldkihrvldwaaeglhnvsisqvelrshiqfydgiktsdihetii
kaaadlisrdapdyqylaarlaifhlrkkaygqfeppalydhvvkmvemgkydnhlledy
teeefkqmdtfidhdrdmtfsyaavkqlegkylvqnrvtgeiyesaqflyilvaaclfsn
ypretrlqyvkrfydavstfkislptpimsgvrtptrqfsscvliecgdsldsinatssa
ivkyvsqragiginagriralgspirggeafhtgcipfykhfqtavkscsqggvrggaat
lfypmwhlevesllvlknnrgvegnrvrhmdygvqinklmytrllkgeditlfspsdvpg
lydaffadqeeferlytkyekddsirkqrvkavelfslmmqerastgriyiqnvdhcnth
spfdpaiapvrqsnlcleialptkplndvndengeialctlsafnlgainnldeleelai
lavraldalldyqdypipaakrgamgrrtlgigvinfayylakhgkrysdgsannlthkt
feaiqyyllkasnelakeqgacpwfnettyakgilpidtykkdldtianeplhydwealr
esikthglrnstlsalmpsetssqisnatngiepprgyvsikaskdgilrqvvpdyehlh
dayellwempgndgylqlvgimqkfidqsisantnydpsrfpsgkvpmqqllkdlltayk
fgvktlyfqntrdg

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2x5bC (C:)
mnqnllvtkrdgsterinldkihrvldwaaeglhnvsisqvelrshiqfydgiktsdihe
tiikaaadlisrdapdyqylaarlaifhlrkkaygqfeppalydhvvkmvemgkydnhll
edyteeefkqmdtfidhdrdmtfsyaavkqlegkylvqnrvtgeiyesaqflyilvaacl
fsnypretrlqyvkrfydavstfkislptpimsgvrtptrqfsscvliecgdsldsinat
ssaivkyvsqragiginagriralgspirggeafhtgcipfykhfqtavkscsqggvrgg
aatlfypmwhlevesllvlknnrgvegnrvrhmdygvqinklmytrllkgeditlfspsd
vpglydaffadqeeferlytkyekddsirkqrvkavelfslmmqerastgriyiqnvdhc
nthspfdpaiapvrqsnlcleialptkplndvndengeialctlsafnlgainnldelee
lailavraldalldyqdypipaakrgamgrrtlgigvinfayylakhgkrysdgsannlt
hktfeaiqyyllkasnelakeqgacpwfnettyakgilpidtykkdldtianeplhydwe
alresikthglrnstlsalmpsetssqisnatngiepprgyvsikaskdgilrqvvpdye
hlhdayellwempgndgylqlvgimqkfidqsisantnydpsrfpsgkvpmqqllkdllt
aykfgvktlyfqntrdgaedaqddlvpsiqddgcesgacki

    Sequence, based on observed residues (ATOM records):
    >2x5bC (C:)
nllvtkrdgsterinldkihrvldwaaeglhnvsisqvelrshiqfydgiktsdihetii
kaaadlisrdapdyqylaarlaifhlrkkaygqfeppalydhvvkmvemgkydnhlledy
teeefkqmdtfidhdrdmtfsyaavkqlegkylvqnrvtgeiyesaqflyilvaaclfsn
ypretrlqyvkrfydavstfkislptpimsgvrtptrqfsscvliecgdsldsinatssa
ivkyvsqragiginagriralgspirggeafhtgcipfykhfqtavkscsqggvrggaat
lfypmwhlevesllvlknnrgvegnrvrhmdygvqinklmytrllkgeditlfspsdvpg
lydaffadqeeferlytkyekddsirkqrvkavelfslmmqerastgriyiqnvdhcnth
spfdpaiapvrqsnlcleialptkplndvndengeialctlsafnlgainnldeleelai
lavraldalldyqdypipaakrgamgrrtlgigvinfayylakhgkrysdgsannlthkt
feaiqyyllkasnelakeqgacpwfnettyakgilpidtykkdldtianeplhydwealr
esikthglrnstlsalmpsetssqisnatngiepprgyvsikaskdgilrqvvpdyehlh
dayellwempgndgylqlvgimqkfidqsisantnydpsrfpsgkvpmqqllkdlltayk
fgvktlyfqntrdg

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2x5bD (D:)
ylvgqidsevdtddlsnfql

    Sequence, based on observed residues (ATOM records):
    >2x5bD (D:)
vdtddlsnfql

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2x5bE (E:)
ylvgqidsevdtddlsnfql

    Sequence, based on observed residues (ATOM records):
    >2x5bE (E:)
vdtddlsnfql

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2x5bF (F:)
ylvgqidsevdtddlsnfql

    Sequence, based on observed residues (ATOM records):
    >2x5bF (F:)
evdtddlsnfql

  • Chain 'P':
    Sequence, based on SEQRES records:
    >2x5bP (P:)
ylvgqidsevdtddlsnfql

    Sequence, based on observed residues (ATOM records):
    >2x5bP (P:)
ylv