PDB entry 2wyi

View 2wyi on RCSB PDB site
Description: structure of the streptococcus pyogenes family gh38 alpha-mannosidase complexed with swainsonine
Deposited on 2009-11-16, released 2010-02-16
The last revision was dated 2011-07-13, with a file datestamp of 2011-06-02.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.189
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: alpha-mannosidase
    Species: STREPTOCOCCUS PYOGENES [TaxId:160490]
    Database cross-references and differences (RAF-indexed):
    • PDB 2WYI
    • Uniprot Q99YP5 (22-922)
  • Chain 'B':
    Compound: alpha-mannosidase
    Species: STREPTOCOCCUS PYOGENES [TaxId:160490]
    Database cross-references and differences (RAF-indexed):
    • PDB 2WYI
    • Uniprot Q99YP5 (Start-922)
  • Heterogens: PG0, ZN, SWA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2wyiA (A:)
mgsshhhhhhssglevlfqgpamatkkvhiishshwdrewymayeqhhmrlinliddlle
vfqtdpdfhsfhldgqtiilddylkvrperepeirqaiasgklrigpfyilqddfltsse
snvrnmligkedcdrwgasvplgyfpdtfgnmgqtpqlmlkaglqaaafgrgirptgfnn
qvdtsekyssqfseiswqgpdnsrilgllfanwysngneiptteaearlfwdkkladaer
fastkhllmmngcdhqpvqldvtkaialanqlypdyefvhscfedyladladdlpenlst
vqgeitsqetdgwytlantasariylkqantrvsrqleniteplaamayevtstyphdql
ryawktlmqnhphdsicgcsvdsvhremmtrfekayevghylakeaakqiadaidtrdfp
mdsqpfvlfntsghsktsvaelsltwkkyhfgqrfpkevyqeaqeylarlsqsfqiidts
gqvrpeaeilgtsiafdydlpkrsfrepyfaikvrlrlpitlpamswktlalklgnettp
setvslyddsnqclengflkvmiqtdgrltitdkqsgliyqdllrfedcgdigneyisrq
pnhdqpfyadqgtiklniisntaqvaeleiqqtfaipisadkllqaemeaviditerqar
rsqekaeltlttlirmeknnprlqfttrfdnqmtnhrlrvlfpthlktdhhladsifetv
krpnhpdatfwknpsnpqhqecfvslfdgengvtignyglneyeilpdtntiaitllrsv
gemgdwgyfptpeaqclgkhslsysfesitkqtqfasywraqegqvpvittqtnqhegtl
aaeysyltgtndqvaltafkrrladnalitrsynlsndktcdfslslpnynakvtnllek
dskqstpsqlgkaeiltlawkkq

    Sequence, based on observed residues (ATOM records):
    >2wyiA (A:)
matkkvhiishshwdrewymayeqhhmrlinliddllevfqtdpdfhsfhldgqtiildd
ylkvrperepeirqaiasgklrigpfyilqddfltssesnvrnmligkedcdrwgasvpl
gyfpdtfgnmgqtpqlmlkaglqaaafgrgirptgfnnqvdtsekyssqfseiswqgpdn
srilgllfanwysngneiptteaearlfwdkkladaerfastkhllmmngcdhqpvqldv
tkaialanqlypdyefvhscfedyladladdlpenlstvqgeitsqetdgwytlantasa
riylkqantrvsrqleniteplaamayevtstyphdqlryawktlmqnhphdsicgcsvd
svhremmtrfekayevghylakeaakqiadaidtrdfpmdsqpfvlfntsghsktsvael
sltwkkyhfgqrfpkevyqeaqeylarlsqsfqiidtsgqvrpeaeilgtsiafdydlpk
rsfrepyfaikvrlrlpitlpamswktlalklgnetvslyddsnqclengflkvmiqtdg
rltitdkqsgliyqdllrfedcgdigneyisrqpnhdqpfyadqgtiklniisntaqvae
leiqqtfaipisadkllqaemeaviditerqarrsqekaeltlttlirmeknnprlqftt
rfdnqmtnhrlrvlfpthlktdhhladsifetvkrpnhpdatfwknpsnpqhqecfvslf
dgengvtignyglneyeilpdtntiaitllrsvgemgdwgyfptpeaqclgkhslsysfe
sitkqtqfasywraqegqvpvittqtnqhegtlaaeysyltgtndqvaltafkrrladna
litrsynlsndktcdfslslpnynakvtnllekdskqstpsqlgkaeiltlawkkq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2wyiB (B:)
mgsshhhhhhssglevlfqgpamatkkvhiishshwdrewymayeqhhmrlinliddlle
vfqtdpdfhsfhldgqtiilddylkvrperepeirqaiasgklrigpfyilqddfltsse
snvrnmligkedcdrwgasvplgyfpdtfgnmgqtpqlmlkaglqaaafgrgirptgfnn
qvdtsekyssqfseiswqgpdnsrilgllfanwysngneiptteaearlfwdkkladaer
fastkhllmmngcdhqpvqldvtkaialanqlypdyefvhscfedyladladdlpenlst
vqgeitsqetdgwytlantasariylkqantrvsrqleniteplaamayevtstyphdql
ryawktlmqnhphdsicgcsvdsvhremmtrfekayevghylakeaakqiadaidtrdfp
mdsqpfvlfntsghsktsvaelsltwkkyhfgqrfpkevyqeaqeylarlsqsfqiidts
gqvrpeaeilgtsiafdydlpkrsfrepyfaikvrlrlpitlpamswktlalklgnettp
setvslyddsnqclengflkvmiqtdgrltitdkqsgliyqdllrfedcgdigneyisrq
pnhdqpfyadqgtiklniisntaqvaeleiqqtfaipisadkllqaemeaviditerqar
rsqekaeltlttlirmeknnprlqfttrfdnqmtnhrlrvlfpthlktdhhladsifetv
krpnhpdatfwknpsnpqhqecfvslfdgengvtignyglneyeilpdtntiaitllrsv
gemgdwgyfptpeaqclgkhslsysfesitkqtqfasywraqegqvpvittqtnqhegtl
aaeysyltgtndqvaltafkrrladnalitrsynlsndktcdfslslpnynakvtnllek
dskqstpsqlgkaeiltlawkkq

    Sequence, based on observed residues (ATOM records):
    >2wyiB (B:)
tkkvhiishshwdrewymayeqhhmrlinliddllevfqtdpdfhsfhldgqtiilddyl
kvrperepeirqaiasgklrigpfyilqddfltssesnvrnmligkedcdrwgasvplgy
fpdtfgnmgqtpqlmlkaglqaaafgrgirptgfnnqvdtsekyssqfseiswqgpdnsr
ilgllfanwysngneiptteaearlfwdkkladaerfastkhllmmngcdhqpvqldvtk
aialanqlypdyefvhscfedyladladdlpenlstvqgeitsqetdgwytlantasari
ylkqantrvsrqleniteplaamayevtstyphdqlryawktlmqnhphdsicgcsvdsv
hremmtrfekayevghylakeaakqiadaidtrdfpmdsqpfvlfntsghsktsvaelsl
twkkyhfgqrfpkevyqeaqeylarlsqsfqiidtsgqvrpeaeilgtsiafdydlpkrs
frepyfaikvrlrlpitlpamswktlalklgnesetvslyddsnqclengflkvmiqtdg
rltitdkqsgliyqdllrfedcgdigneyisrqpnhdqpfyadqgtiklniisntaqvae
leiqqtfaipisadkllqaemeaviditerqarrsqekaeltlttlirmeknnprlqftt
rfdnqmtnhrlrvlfpthlktdhhladsifetvkrpnhpdatfwknpsnpqhqecfvslf
dgengvtignyglneyeilpdtntiaitllrsvgemgdwgyfptpeaqclgkhslsysfe
sitkqtqfasywraqegqvpvittqtnqhegtlaaeysyltgtndqvaltafkrrladna
litrsynlsndktcdfslslpnynakvtnllekdskqstpsqlgkaeiltlawkkq