PDB entry 2wy3
View 2wy3 on RCSB PDB site
Description: Structure of the HCMV UL16-MICB complex elucidates select binding of a viral immunoevasin to diverse NKG2D ligands
Class: immune system/viral protein
Keywords: immune system-viral protein complex, immune response, innate immunity, structural mimicry, immunoglobulin domain, membrane, cytolysis, ulbp, nkg2d, nk cell, cell membrane, transmembrane, viral immune evasion, natural killer cell, convergent evolution
Deposited on
2009-11-11, released
2010-02-02
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-06-29.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.45
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: MHC class I polypeptide-related sequence b
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- PDB 2WY3 (0-0)
- conflict (57)
- conflict (113)
- Uniprot Q29980 (1-End)
Domains in SCOPe 2.08: d2wy3a_ - Chain 'B':
Compound: uncharacterized protein ul16
Species: HUMAN HERPESVIRUS 5 STRAIN AD169 [TaxId:10360]
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: MHC class I polypeptide-related sequence b
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- PDB 2WY3
- conflict (57)
- conflict (113)
- Uniprot Q29980 (1-End)
Domains in SCOPe 2.08: d2wy3c_ - Chain 'D':
Compound: uncharacterized protein ul16
Species: HUMAN HERPESVIRUS 5 STRAIN AD169 [TaxId:10360]
Database cross-references and differences (RAF-indexed):
- Heterogens: PEU, ACT, NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2wy3A (A:)
mephslrynlmvlsqdesvqsgflaeghldgqpflrydrqkrrakpqgqwaedvlgaetw
dtetedltengqdlrrtlthikdqkgglhslqeirvceihedsstrgsrhfyyngelfls
qnletqestvpqssraqtlamnvtnfwkedamktkthyramqadclqklqrylksgvair
rtvppmvnvtcsevsegnitvtcrassfyprnitltwrqdgvslshntqqwgdvlpdgng
tyqtwvatrirqgeeqrftcymehsgnhgthpvpsgkvlvlqsqrtdfpyvsaampcfvi
iiilcvpcckkktsaaegp
Sequence, based on observed residues (ATOM records): (download)
>2wy3A (A:)
mephslrynlmvlsqdesvqsgflaeghldgqpflrydrqkrrakpqgqwaedvlgaetw
dtetedltengqdlrrtlthikdqkgglhslqeirvceihedsstrgsrhfyyngelfls
qnletqestvpqssraqtlamnvtnfwkektkthyramqadclqklqrylksg
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2wy3C (C:)
mephslrynlmvlsqdesvqsgflaeghldgqpflrydrqkrrakpqgqwaedvlgaetw
dtetedltengqdlrrtlthikdqkgglhslqeirvceihedsstrgsrhfyyngelfls
qnletqestvpqssraqtlamnvtnfwkedamktkthyramqadclqklqrylksgvair
rtvppmvnvtcsevsegnitvtcrassfyprnitltwrqdgvslshntqqwgdvlpdgng
tyqtwvatrirqgeeqrftcymehsgnhgthpvpsgkvlvlqsqrtdfpyvsaampcfvi
iiilcvpcckkktsaaegp
Sequence, based on observed residues (ATOM records): (download)
>2wy3C (C:)
ephslrynlmvlsqdesvqsgflaeghldgqpflrydrqkrrakpqgqwaedvlgaetwd
tetedltengqdlrrtlthilhslqeirvceihedsstrgsrhfyyngelflsqnletqe
stvpqssraqtlamnvtnfwkamktkthyramqadclqklqrylksg
- Chain 'D':
No sequence available.