PDB entry 2wvt

View 2wvt on RCSB PDB site
Description: crystal structure of an alpha-l-fucosidase gh29 from bacteroides thetaiotaomicron in complex with a novel iminosugar fucosidase inhibitor
Deposited on 2009-10-20, released 2010-02-02
The last revision was dated 2011-06-15, with a file datestamp of 2011-06-10.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.20936
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: alpha-l-fucosidase
    Species: BACTEROIDES THETAIOTAOMICRON [TaxId:226186]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: alpha-l-fucosidase
    Species: BACTEROIDES THETAIOTAOMICRON [TaxId:226186]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: FHN, GOL, IMD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2wvtA (A:)
eakkeiplkygatnegkrqdpamqkfrdnrlgafihwglyaipggewngkvyggaaewlk
swakvpadewlklmdqwnptkfdakkwakmakemgtkyvkittkhhegfclwpskytkyt
vantpykrdilgelvkayndegidvhfyfsvmdwsnpdyrydikskedsiafsrfleftd
nqlkelatryptvkdfwfdgtwdasvkkngwwtahaeqmlkelvpgvainsrlraddkgk
rhfdsngrlmgdyesgyerrlpdpvkdlkvtqwdweacmtipenqwgyhkdwslsyvktp
ievidrivhavsmggnmvvnfgpqadgdfrpeekamataigkwmnrygkavyacdyagfe
kqdwgyytrgkndevymvvfnqpyserlivktpkgitvekatllttgeditvvettrney
nvsvpkknpgepyviqlkvraak

    Sequence, based on observed residues (ATOM records):
    >2wvtA (A:)
eiplkygatnegkrqdpamqkfrdnrlgafihwglyaipggewngkvyggaaewlkswak
vpadewlklmdqwnptkfdakkwakmakemgtkyvkittkhhegfclwpskytkytvant
pykrdilgelvkayndegidvhfyfsvmdwsnpdyrydikskedsiafsrfleftdnqlk
elatryptvkdfwfdgtwdasvkkngwwtahaeqmlkelvpgvainsrlraddkgkrhfd
sngrlmgdyesgyerrlpdpvkdlkvtqwdweacmtipenqwgyhkdwslsyvktpievi
drivhavsmggnmvvnfgpqadgdfrpeekamataigkwmnrygkavyacdyagfekqdw
gyytrgkndevymvvfnqpyserlivktpkgitvekatllttgeditvvettrneynvsv
pkknpgepyviqlkvraa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2wvtB (B:)
eakkeiplkygatnegkrqdpamqkfrdnrlgafihwglyaipggewngkvyggaaewlk
swakvpadewlklmdqwnptkfdakkwakmakemgtkyvkittkhhegfclwpskytkyt
vantpykrdilgelvkayndegidvhfyfsvmdwsnpdyrydikskedsiafsrfleftd
nqlkelatryptvkdfwfdgtwdasvkkngwwtahaeqmlkelvpgvainsrlraddkgk
rhfdsngrlmgdyesgyerrlpdpvkdlkvtqwdweacmtipenqwgyhkdwslsyvktp
ievidrivhavsmggnmvvnfgpqadgdfrpeekamataigkwmnrygkavyacdyagfe
kqdwgyytrgkndevymvvfnqpyserlivktpkgitvekatllttgeditvvettrney
nvsvpkknpgepyviqlkvraak

    Sequence, based on observed residues (ATOM records):
    >2wvtB (B:)
eiplkygatnegkrqdpamqkfrdnrlgafihwglyaipggewngkvyggaaewlkswak
vpadewlklmdqwnptkfdakkwakmakemgtkyvkittkhhegfclwpskytkytvant
pykrdilgelvkayndegidvhfyfsvmdwsnpdyrydikskedsiafsrfleftdnqlk
elatryptvkdfwfdgtwdasvkkngwwtahaeqmlkelvpgvainsrlraddkgkrhfd
sngrlmgdyesgyerrlpdpvkdlkvtqwdweacmtipenqwgyhkdwslsyvktpievi
drivhavsmggnmvvnfgpqadgdfrpeekamataigkwmnrygkavyacdyagfekqdw
gyytrgkndevymvvfnqpyserlivktpkgitvekatllttgeditvvettrneynvsv
pkknpgepyviqlkvraak