PDB entry 2wu5
View 2wu5 on RCSB PDB site
Description: crystal structure of the e. coli succinate:quinone oxidoreductase (sqr) sdhd his71met mutant
Class: oxidoreductase
Keywords: cell inner membrane, tricarboxylic acid cycle, metal-binding, transmembrane, transport, flavoprotein, oxidoreductase, electron transport
Deposited on
2009-09-29, released
2010-08-25
The last revision prior to the SCOPe 2.07 freeze date was dated
2010-08-25, with a file datestamp of
2010-08-20.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.2153
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Succinate dehydrogenase flavoprotein subunit
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2wu5a1, d2wu5a2, d2wu5a3 - Chain 'B':
Compound: succinate dehydrogenase iron-sulfur subunit
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2wu5b1, d2wu5b2 - Chain 'C':
Compound: succinate dehydrogenase cytochrome b556 subunit
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2wu5c_ - Chain 'D':
Compound: succinate dehydrogenase hydrophobic membrane anchor protein subunit
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: Succinate dehydrogenase flavoprotein subunit
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2wu5e1, d2wu5e2, d2wu5e3 - Chain 'F':
Compound: succinate dehydrogenase iron-sulfur subunit
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2wu5f1, d2wu5f2 - Chain 'G':
Compound: succinate dehydrogenase cytochrome b556 subunit
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2wu5g_ - Chain 'H':
Compound: succinate dehydrogenase hydrophobic membrane anchor protein subunit
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: Succinate dehydrogenase flavoprotein subunit
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2wu5i1, d2wu5i2, d2wu5i3 - Chain 'J':
Compound: succinate dehydrogenase iron-sulfur subunit
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2wu5j1, d2wu5j2 - Chain 'K':
Compound: succinate dehydrogenase cytochrome b556 subunit
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2wu5k_ - Chain 'L':
Compound: succinate dehydrogenase hydrophobic membrane anchor protein subunit
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Heterogens: FAD, TEO, NA, FES, SF4, F3S, HEM, CBE, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2wu5A (A:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggitvalgnt
hednwewhmydtvkgsdyigdqdaieymcktgpeailelehmglpfsrlddgriyqrpfg
gqsknfggeqaartaaaadrtghallhtlyqqnlknhttifsewyaldlvknqdgavvgc
talcietgevvyfkaratvlatggagriyqsttnahintgdgvgmairagvpvqdmemwq
fhptgiagagvlvtegcrgeggyllnkhgerfmeryapnakdlagrdvvarsimieireg
rgcdgpwgphaklkldhlgkevlesrlpgilelsrtfahvdpvkepipviptchymmggi
ptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslldlvvfgraaglhlq
esiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecmqhnfsvfregdam
akgleqlkvirerlknarlddtssefntqrvecleldnlmetayatavsanfrtesrgah
srfdfpdrddenwlchslylpesesmtrrsvnmepklrpafppkirty
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2wu5B (B:)
mrlefsiyrynpdvddaprmqdytleadegrdmmlldaliqlkekdpslsfrrscregvc
gsdglnmngknglacitpisalnqpgkkivirplpglpvirdlvvdmgqfyaqyekikpy
llnngqnpparehlqmpeqrekldglyecilcaccstscpsfwwnpdkfigpagllaayr
flidsrdtetdsrldglsdafsvfrchsimncvsvcpkglnptraighiksmllqrna
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2wu5C (C:)
mirnvkkqrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeq
asaimgsffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvl
sllagvlvw
Sequence, based on observed residues (ATOM records): (download)
>2wu5C (C:)
qrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeqasaimgs
ffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvlsllagvl
vw
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>2wu5E (E:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggitvalgnt
hednwewhmydtvkgsdyigdqdaieymcktgpeailelehmglpfsrlddgriyqrpfg
gqsknfggeqaartaaaadrtghallhtlyqqnlknhttifsewyaldlvknqdgavvgc
talcietgevvyfkaratvlatggagriyqsttnahintgdgvgmairagvpvqdmemwq
fhptgiagagvlvtegcrgeggyllnkhgerfmeryapnakdlagrdvvarsimieireg
rgcdgpwgphaklkldhlgkevlesrlpgilelsrtfahvdpvkepipviptchymmggi
ptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslldlvvfgraaglhlq
esiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecmqhnfsvfregdam
akgleqlkvirerlknarlddtssefntqrvecleldnlmetayatavsanfrtesrgah
srfdfpdrddenwlchslylpesesmtrrsvnmepklrpafppkirty
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>2wu5F (F:)
mrlefsiyrynpdvddaprmqdytleadegrdmmlldaliqlkekdpslsfrrscregvc
gsdglnmngknglacitpisalnqpgkkivirplpglpvirdlvvdmgqfyaqyekikpy
llnngqnpparehlqmpeqrekldglyecilcaccstscpsfwwnpdkfigpagllaayr
flidsrdtetdsrldglsdafsvfrchsimncvsvcpkglnptraighiksmllqrna
- Chain 'G':
Sequence, based on SEQRES records: (download)
>2wu5G (G:)
mirnvkkqrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeq
asaimgsffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvl
sllagvlvw
Sequence, based on observed residues (ATOM records): (download)
>2wu5G (G:)
qrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeqasaimgs
ffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvlsllagvl
vw
- Chain 'H':
No sequence available.
- Chain 'I':
Sequence; same for both SEQRES and ATOM records: (download)
>2wu5I (I:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggitvalgnt
hednwewhmydtvkgsdyigdqdaieymcktgpeailelehmglpfsrlddgriyqrpfg
gqsknfggeqaartaaaadrtghallhtlyqqnlknhttifsewyaldlvknqdgavvgc
talcietgevvyfkaratvlatggagriyqsttnahintgdgvgmairagvpvqdmemwq
fhptgiagagvlvtegcrgeggyllnkhgerfmeryapnakdlagrdvvarsimieireg
rgcdgpwgphaklkldhlgkevlesrlpgilelsrtfahvdpvkepipviptchymmggi
ptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslldlvvfgraaglhlq
esiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecmqhnfsvfregdam
akgleqlkvirerlknarlddtssefntqrvecleldnlmetayatavsanfrtesrgah
srfdfpdrddenwlchslylpesesmtrrsvnmepklrpafppkirty
- Chain 'J':
Sequence; same for both SEQRES and ATOM records: (download)
>2wu5J (J:)
mrlefsiyrynpdvddaprmqdytleadegrdmmlldaliqlkekdpslsfrrscregvc
gsdglnmngknglacitpisalnqpgkkivirplpglpvirdlvvdmgqfyaqyekikpy
llnngqnpparehlqmpeqrekldglyecilcaccstscpsfwwnpdkfigpagllaayr
flidsrdtetdsrldglsdafsvfrchsimncvsvcpkglnptraighiksmllqrna
- Chain 'K':
Sequence, based on SEQRES records: (download)
>2wu5K (K:)
mirnvkkqrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeq
asaimgsffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvl
sllagvlvw
Sequence, based on observed residues (ATOM records): (download)
>2wu5K (K:)
qrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeqasaimgs
ffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvlsllagvl
vw
- Chain 'L':
No sequence available.