PDB entry 2ws3

View 2ws3 on RCSB PDB site
Description: crystal structure of the e. coli succinate:quinone oxidoreductase (sqr) sdhd tyr83phe mutant
Deposited on 2009-09-03, released 2010-08-25
The last revision was dated 2010-09-29, with a file datestamp of 2010-09-24.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: 0.22039
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Succinate dehydrogenase flavoprotein subunit
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: succinate dehydrogenase iron-sulfur subunit
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Succinate dehydrogenase cytochrome b-556 subunit
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: succinate dehydrogenase hydrophobic membrane anchor subunit
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0AC44 (Start-114)
      • engineered mutation (82)
  • Chain 'E':
    Compound: Succinate dehydrogenase flavoprotein subunit
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: succinate dehydrogenase iron-sulfur subunit
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Succinate dehydrogenase cytochrome b-556 subunit
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: succinate dehydrogenase hydrophobic membrane anchor subunit
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0AC44 (Start-114)
      • engineered mutation (82)
  • Chain 'I':
    Compound: Succinate dehydrogenase flavoprotein subunit
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: succinate dehydrogenase iron-sulfur subunit
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: Succinate dehydrogenase cytochrome b-556 subunit
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: succinate dehydrogenase hydrophobic membrane anchor subunit
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0AC44 (Start-114)
      • engineered mutation (82)
  • Heterogens: FAD, NA, TEO, FES, SF4, F3S, CBE, HEM

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >2ws3A (A:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggitvalgnt
hednwewhmydtvkgsdyigdqdaieymcktgpeailelehmglpfsrlddgriyqrpfg
gqsknfggeqaartaaaadrtghallhtlyqqnlknhttifsewyaldlvknqdgavvgc
talcietgevvyfkaratvlatggagriyqsttnahintgdgvgmairagvpvqdmemwq
fhptgiagagvlvtegcrgeggyllnkhgerfmeryapnakdlagrdvvarsimieireg
rgcdgpwgphaklkldhlgkevlesrlpgilelsrtfahvdpvkepipviptchymmggi
ptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslldlvvfgraaglhlq
esiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecmqhnfsvfregdam
akgleqlkvirerlknarlddtssefntqrvecleldnlmetayatavsanfrtesrgah
srfdfpdrddenwlchslylpesesmtrrsvnmepklrpafppkirty

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >2ws3B (B:)
mrlefsiyrynpdvddaprmqdytleadegrdmmlldaliqlkekdpslsfrrscregvc
gsdglnmngknglacitpisalnqpgkkivirplpglpvirdlvvdmgqfyaqyekikpy
llnngqnpparehlqmpeqrekldglyecilcaccstscpsfwwnpdkfigpagllaayr
flidsrdtetdsrldglsdafsvfrchsimncvsvcpkglnptraighiksmllqrna

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2ws3C (C:)
mirnvkkqrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeq
asaimgsffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvl
sllagvlvw

    Sequence, based on observed residues (ATOM records):
    >2ws3C (C:)
qrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeqasaimgs
ffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvlsllagvl
v

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2ws3D (D:)
mvsnasalgrngvhdfilvrataivltlyiiymvgffatsgeltyevwigffasaftkvf
tllalfsilihawigmwqvltdfvkplalrlmlqlvivvalvvyviygfvvvwgv

    Sequence, based on observed residues (ATOM records):
    >2ws3D (D:)
ngvhdfilvrataivltlyiiymvgffatsgeltyevwigffasaftkvftllalfsili
hawigmwqvltdfvkplalrlmlqlvivvalvvyviygfvvvwgv

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >2ws3E (E:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggitvalgnt
hednwewhmydtvkgsdyigdqdaieymcktgpeailelehmglpfsrlddgriyqrpfg
gqsknfggeqaartaaaadrtghallhtlyqqnlknhttifsewyaldlvknqdgavvgc
talcietgevvyfkaratvlatggagriyqsttnahintgdgvgmairagvpvqdmemwq
fhptgiagagvlvtegcrgeggyllnkhgerfmeryapnakdlagrdvvarsimieireg
rgcdgpwgphaklkldhlgkevlesrlpgilelsrtfahvdpvkepipviptchymmggi
ptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslldlvvfgraaglhlq
esiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecmqhnfsvfregdam
akgleqlkvirerlknarlddtssefntqrvecleldnlmetayatavsanfrtesrgah
srfdfpdrddenwlchslylpesesmtrrsvnmepklrpafppkirty

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >2ws3F (F:)
mrlefsiyrynpdvddaprmqdytleadegrdmmlldaliqlkekdpslsfrrscregvc
gsdglnmngknglacitpisalnqpgkkivirplpglpvirdlvvdmgqfyaqyekikpy
llnngqnpparehlqmpeqrekldglyecilcaccstscpsfwwnpdkfigpagllaayr
flidsrdtetdsrldglsdafsvfrchsimncvsvcpkglnptraighiksmllqrna

  • Chain 'G':
    Sequence, based on SEQRES records:
    >2ws3G (G:)
mirnvkkqrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeq
asaimgsffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvl
sllagvlvw

    Sequence, based on observed residues (ATOM records):
    >2ws3G (G:)
qrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeqasaimgs
ffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvlsllagvl
v

  • Chain 'H':
    Sequence, based on SEQRES records:
    >2ws3H (H:)
mvsnasalgrngvhdfilvrataivltlyiiymvgffatsgeltyevwigffasaftkvf
tllalfsilihawigmwqvltdfvkplalrlmlqlvivvalvvyviygfvvvwgv

    Sequence, based on observed residues (ATOM records):
    >2ws3H (H:)
ngvhdfilvrataivltlyiiymvgffatsgeltyevwigffasaftkvftllalfsili
hawigmwqvltdfvkplalrlmlqlvivvalvvyviygfvvvwgv

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records:
    >2ws3I (I:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggitvalgnt
hednwewhmydtvkgsdyigdqdaieymcktgpeailelehmglpfsrlddgriyqrpfg
gqsknfggeqaartaaaadrtghallhtlyqqnlknhttifsewyaldlvknqdgavvgc
talcietgevvyfkaratvlatggagriyqsttnahintgdgvgmairagvpvqdmemwq
fhptgiagagvlvtegcrgeggyllnkhgerfmeryapnakdlagrdvvarsimieireg
rgcdgpwgphaklkldhlgkevlesrlpgilelsrtfahvdpvkepipviptchymmggi
ptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslldlvvfgraaglhlq
esiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecmqhnfsvfregdam
akgleqlkvirerlknarlddtssefntqrvecleldnlmetayatavsanfrtesrgah
srfdfpdrddenwlchslylpesesmtrrsvnmepklrpafppkirty

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >2ws3J (J:)
mrlefsiyrynpdvddaprmqdytleadegrdmmlldaliqlkekdpslsfrrscregvc
gsdglnmngknglacitpisalnqpgkkivirplpglpvirdlvvdmgqfyaqyekikpy
llnngqnpparehlqmpeqrekldglyecilcaccstscpsfwwnpdkfigpagllaayr
flidsrdtetdsrldglsdafsvfrchsimncvsvcpkglnptraighiksmllqrna

  • Chain 'K':
    Sequence, based on SEQRES records:
    >2ws3K (K:)
mirnvkkqrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeq
asaimgsffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvl
sllagvlvw

    Sequence, based on observed residues (ATOM records):
    >2ws3K (K:)
qrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeqasaimgs
ffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvlsllagvl
v

  • Chain 'L':
    Sequence, based on SEQRES records:
    >2ws3L (L:)
mvsnasalgrngvhdfilvrataivltlyiiymvgffatsgeltyevwigffasaftkvf
tllalfsilihawigmwqvltdfvkplalrlmlqlvivvalvvyviygfvvvwgv

    Sequence, based on observed residues (ATOM records):
    >2ws3L (L:)
ngvhdfilvrataivltlyiiymvgffatsgeltyevwigffasaftkvftllalfsili
hawigmwqvltdfvkplalrlmlqlvivvalvvyviygfvvvwgv