SCOPe 2.05: Structural Classification of Proteins — extended

PDB entry 2wrh

View 2wrh on RCSB PDB site
Description: structure of H1 duck albert hemagglutinin with human receptor
Class: viral protein
Keywords: viral protein, envelope protein, glycoprotein, lipoprotein
Deposited on 2009-09-01, released 2009-09-29
The last revision prior to the SCOPe 2.05 freeze date was dated 2012-11-28, with a file datestamp of 2012-11-23.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.2301
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

Chain 'H':
Compound: Hemagglutinin HA1 chain
Species: INFLUENZA A VIRUS (A/MALLARD/ALBERTA/35/1976(H1N1)) [TaxId:352520]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WCE0 (0-End)
  - conflict (321)
Domains in SCOPe 2.05: d2wrhh_
Chain 'I':
Compound: Hemagglutinin HA2 chain
Species: INFLUENZA A VIRUS (A/MALLARD/ALBERTA/35/1976(H1N1)) [TaxId:352520]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WCE0 (0-End)
Domains in SCOPe 2.05: d2wrhi_
Chain 'J':
Compound: Hemagglutinin HA1 chain
Species: INFLUENZA A VIRUS (A/MALLARD/ALBERTA/35/1976(H1N1)) [TaxId:352520]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WCE0 (0-End)
  - conflict (321)
Domains in SCOPe 2.05: d2wrhj_
Chain 'K':
Compound: Hemagglutinin HA2 chain
Species: INFLUENZA A VIRUS (A/MALLARD/ALBERTA/35/1976(H1N1)) [TaxId:352520]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WCE0 (0-End)
Domains in SCOPe 2.05: d2wrhk_
Chain 'L':
Compound: Hemagglutinin HA1 chain
Species: INFLUENZA A VIRUS (A/MALLARD/ALBERTA/35/1976(H1N1)) [TaxId:352520]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WCE0 (0-End)
  - conflict (321)
Domains in SCOPe 2.05: d2wrhl_
Chain 'M':
Compound: Hemagglutinin HA2 chain
Species: INFLUENZA A VIRUS (A/MALLARD/ALBERTA/35/1976(H1N1)) [TaxId:352520]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WCE0 (0-End)
Domains in SCOPe 2.05: d2wrhm_
Heterogens: SIA

PDB Chain Sequences:

Chain 'H':
Sequence, based on SEQRES records: (download)

>2wrhH (H:)
dticvgyhannstdtvdtvleknvtvthsvnlledshngklcslgiaplqlgkcnvagwl
lgnpecdllltanswsyiietsnsengtcypgefidyeelreqlssvssfekfeifpkas
swpnhetkgvtaacsysgassfyrnllwitkkgtsypklsksytnnkgkevlvlwgvhhp
psvseqqslyqnadayvsvgsskynrrfapeiaarpkvrgqagrmnyywtlldqgdtitf
eatgnliapwyafalnkgsdsgiitsdapvhncdtrcqtphgalnsslpfqnvhpitige
cpkyvkstklrmatglrnvpsrqs

Sequence, based on observed residues (ATOM records): (download)

>2wrhH (H:)
dticvgyhannstdtvdtvleknvtvthsvnlledshngklcslgiaplqlgkcnvagwl
lgnpecdllltanswsyiietsnsengtcypgefidyeelreqlssvssfekfeifpkas
swpnhetkgvtaacsysgassfyrnllwitkkgtsypklsksytnnkgkevlvlwgvhhp
psvseqqslyqnadayvsvgsskynrrfapeiaarpkvrgqagrmnyywtlldqgdtitf
eatgnliapwyafalnkgsdsgiitsdapvhncdtrcqtphgalnsslpfqnvhpitige
cpkyvkstklrmatglrnvpsr

Chain 'I':
Sequence, based on SEQRES records: (download)

>2wrhI (I:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitskvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldvwtynaellvllenertldfhdsnvrnlye
kvksqlrnnakeigngcfefyhkcddecmesvkngtydypkyseesklnreeidgvkles
mgvyqilaiystvasslvllvslgaisfwmcsngslqcrici

Sequence, based on observed residues (ATOM records): (download)

>2wrhI (I:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitskvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldvwtynaellvllenertldfhdsnvrnlye
kvksqlrnnakeigngcfefyhkcddecmesvkngtydyp

Chain 'J':
Sequence, based on SEQRES records: (download)

>2wrhJ (J:)
dticvgyhannstdtvdtvleknvtvthsvnlledshngklcslgiaplqlgkcnvagwl
lgnpecdllltanswsyiietsnsengtcypgefidyeelreqlssvssfekfeifpkas
swpnhetkgvtaacsysgassfyrnllwitkkgtsypklsksytnnkgkevlvlwgvhhp
psvseqqslyqnadayvsvgsskynrrfapeiaarpkvrgqagrmnyywtlldqgdtitf
eatgnliapwyafalnkgsdsgiitsdapvhncdtrcqtphgalnsslpfqnvhpitige
cpkyvkstklrmatglrnvpsrqs

Sequence, based on observed residues (ATOM records): (download)

>2wrhJ (J:)
dticvgyhannstdtvdtvleknvtvthsvnlledshngklcslgiaplqlgkcnvagwl
lgnpecdllltanswsyiietsnsengtcypgefidyeelreqlssvssfekfeifpkas
swpnhetkgvtaacsysgassfyrnllwitkkgtsypklsksytnnkgkevlvlwgvhhp
psvseqqslyqnadayvsvgsskynrrfapeiaarpkvrgqagrmnyywtlldqgdtitf
eatgnliapwyafalnkgsdsgiitsdapvhncdtrcqtphgalnsslpfqnvhpitige
cpkyvkstklrmatglrnvpsr

Chain 'K':
Sequence, based on SEQRES records: (download)

>2wrhK (K:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitskvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldvwtynaellvllenertldfhdsnvrnlye
kvksqlrnnakeigngcfefyhkcddecmesvkngtydypkyseesklnreeidgvkles
mgvyqilaiystvasslvllvslgaisfwmcsngslqcrici

Sequence, based on observed residues (ATOM records): (download)

>2wrhK (K:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitskvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldvwtynaellvllenertldfhdsnvrnlye
kvksqlrnnakeigngcfefyhkcddecmesvkngtydyp

Chain 'L':
Sequence, based on SEQRES records: (download)

>2wrhL (L:)
dticvgyhannstdtvdtvleknvtvthsvnlledshngklcslgiaplqlgkcnvagwl
lgnpecdllltanswsyiietsnsengtcypgefidyeelreqlssvssfekfeifpkas
swpnhetkgvtaacsysgassfyrnllwitkkgtsypklsksytnnkgkevlvlwgvhhp
psvseqqslyqnadayvsvgsskynrrfapeiaarpkvrgqagrmnyywtlldqgdtitf
eatgnliapwyafalnkgsdsgiitsdapvhncdtrcqtphgalnsslpfqnvhpitige
cpkyvkstklrmatglrnvpsrqs

Sequence, based on observed residues (ATOM records): (download)

>2wrhL (L:)
dticvgyhannstdtvdtvleknvtvthsvnlledshngklcslgiaplqlgkcnvagwl
lgnpecdllltanswsyiietsnsengtcypgefidyeelreqlssvssfekfeifpkas
swpnhetkgvtaacsysgassfyrnllwitkkgtsypklsksytnnkgkevlvlwgvhhp
psvseqqslyqnadayvsvgsskynrrfapeiaarpkvrgqagrmnyywtlldqgdtitf
eatgnliapwyafalnkgsdsgiitsdapvhncdtrcqtphgalnsslpfqnvhpitige
cpkyvkstklrmatglrnvpsr

Chain 'M':
Sequence, based on SEQRES records: (download)

>2wrhM (M:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitskvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldvwtynaellvllenertldfhdsnvrnlye
kvksqlrnnakeigngcfefyhkcddecmesvkngtydypkyseesklnreeidgvkles
mgvyqilaiystvasslvllvslgaisfwmcsngslqcrici

Sequence, based on observed residues (ATOM records): (download)

>2wrhM (M:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitskvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldvwtynaellvllenertldfhdsnvrnlye
kvksqlrnnakeigngcfefyhkcddecmesvkngtydyp