PDB entry 2wrg

View 2wrg on RCSB PDB site
Description: structure of h1 1918 hemagglutinin with human receptor
Class: viral protein
Keywords: viral protein, envelope protein, glycoprotein, lipoprotein
Deposited on 2009-09-01, released 2009-09-29
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-10-20, with a file datestamp of 2009-10-16.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.2703
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: Hemagglutinin HA1 chain
    Species: INFLUENZA A VIRUS (A/BREVIG MISSION/1/1918(H1N1)) [TaxId:88776]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WFX3 (0-End)
      • conflict (323)
    Domains in SCOPe 2.05: d2wrgh_
  • Chain 'I':
    Compound: Hemagglutinin HA2 chain
    Species: INFLUENZA A VIRUS (A/BREVIG MISSION/1/1918(H1N1)) [TaxId:88776]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2wrgi_
  • Chain 'J':
    Compound: Hemagglutinin HA1 chain
    Species: INFLUENZA A VIRUS (A/BREVIG MISSION/1/1918(H1N1)) [TaxId:88776]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WFX3 (0-End)
      • conflict (323)
    Domains in SCOPe 2.05: d2wrgj_
  • Chain 'K':
    Compound: Hemagglutinin HA2 chain
    Species: INFLUENZA A VIRUS (A/BREVIG MISSION/1/1918(H1N1)) [TaxId:88776]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2wrgk_
  • Chain 'L':
    Compound: Hemagglutinin HA1 chain
    Species: INFLUENZA A VIRUS (A/BREVIG MISSION/1/1918(H1N1)) [TaxId:88776]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WFX3 (0-End)
      • conflict (323)
    Domains in SCOPe 2.05: d2wrgl_
  • Chain 'M':
    Compound: Hemagglutinin HA2 chain
    Species: INFLUENZA A VIRUS (A/BREVIG MISSION/1/1918(H1N1)) [TaxId:88776]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2wrgm_
  • Heterogens: NAG

PDB Chain Sequences:

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2wrgH (H:)
dticigyhannstdtvdtvleknvtvthsvnlledshngklcklkgiaplqlgkcniagw
llgnpecdllltasswsyivetsnsengtcypgdfidyeelreqlssvssfekfeifpkt
sswpnhettkgvtaacsyagassfyrnllwltkkgssypklsksyvnnkgkevlvlwgvh
hpptgtdqqslyqnadayvsvgsskynrrftpeiaarpkvrdqagrmnyywtllepgdti
tfeatgnliapwyafalnrgsgsgiitsdapvhdcntkcqtphgainsslpfqnihpvti
gecpkyvrstklrmatglrnipsrqs

    Sequence, based on observed residues (ATOM records): (download) 
    >2wrgH (H:)
dticigyhannstdtvdtvleknvtvthsvnlledshngklcklkgiaplqlgkcniagw
llgnpecdllltasswsyivetsnsengtcypgdfidyeelreqlssvssfekfeifpkt
sswpnhettkgvtaacsyagassfyrnllwltkkgssypklsksyvnnkgkevlvlwgvh
hpptgtdqqslyqnadayvsvgsskynrrftpeiaarpkvrdqagrmnyywtllepgdti
tfeatgnliapwyafalnrgsgsgiitsdapvhdcntkcqtphgainsslpfqnihpvti
gecpkyvrstklrmatglrnipsrq

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >2wrgI (I:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitnkvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldiwtynaellvllenertldfhdsnvrnlye
kvksqlknnakeigngcfefyhkcddacmesvrngtydypkyseesklnreeidgvkles
mgvyqilaiystvasslvllvslgaisfwmcsngslqcrici

    Sequence, based on observed residues (ATOM records): (download) 
    >2wrgI (I:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitnkvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldiwtynaellvllenertldfhdsnvrnlye
kvksqlknnakeigngcfefyhkcddacmesvrngtydypk

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >2wrgJ (J:)
dticigyhannstdtvdtvleknvtvthsvnlledshngklcklkgiaplqlgkcniagw
llgnpecdllltasswsyivetsnsengtcypgdfidyeelreqlssvssfekfeifpkt
sswpnhettkgvtaacsyagassfyrnllwltkkgssypklsksyvnnkgkevlvlwgvh
hpptgtdqqslyqnadayvsvgsskynrrftpeiaarpkvrdqagrmnyywtllepgdti
tfeatgnliapwyafalnrgsgsgiitsdapvhdcntkcqtphgainsslpfqnihpvti
gecpkyvrstklrmatglrnipsrqs

    Sequence, based on observed residues (ATOM records): (download) 
    >2wrgJ (J:)
dticigyhannstdtvdtvleknvtvthsvnlledshngklcklkgiaplqlgkcniagw
llgnpecdllltasswsyivetsnsengtcypgdfidyeelreqlssvssfekfeifpkt
sswpnhettkgvtaacsyagassfyrnllwltkkgssypklsksyvnnkgkevlvlwgvh
hpptgtdqqslyqnadayvsvgsskynrrftpeiaarpkvrdqagrmnyywtllepgdti
tfeatgnliapwyafalnrgsgsgiitsdapvhdcntkcqtphgainsslpfqnihpvti
gecpkyvrstklrmatglrnipsrq

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >2wrgK (K:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitnkvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldiwtynaellvllenertldfhdsnvrnlye
kvksqlknnakeigngcfefyhkcddacmesvrngtydypkyseesklnreeidgvkles
mgvyqilaiystvasslvllvslgaisfwmcsngslqcrici

    Sequence, based on observed residues (ATOM records): (download) 
    >2wrgK (K:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitnkvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldiwtynaellvllenertldfhdsnvrnlye
kvksqlknnakeigngcfefyhkcddacmesvrngtydypk

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >2wrgL (L:)
dticigyhannstdtvdtvleknvtvthsvnlledshngklcklkgiaplqlgkcniagw
llgnpecdllltasswsyivetsnsengtcypgdfidyeelreqlssvssfekfeifpkt
sswpnhettkgvtaacsyagassfyrnllwltkkgssypklsksyvnnkgkevlvlwgvh
hpptgtdqqslyqnadayvsvgsskynrrftpeiaarpkvrdqagrmnyywtllepgdti
tfeatgnliapwyafalnrgsgsgiitsdapvhdcntkcqtphgainsslpfqnihpvti
gecpkyvrstklrmatglrnipsrqs

    Sequence, based on observed residues (ATOM records): (download) 
    >2wrgL (L:)
dticigyhannstdtvdtvleknvtvthsvnlledshngklcklkgiaplqlgkcniagw
llgnpecdllltasswsyivetsnsengtcypgdfidyeelreqlssvssfekfeifpkt
sswpnhettkgvtaacsyagassfyrnllwltkkgssypklsksyvnnkgkevlvlwgvh
hpptgtdqqslyqnadayvsvgsskynrrftpeiaarpkvrdqagrmnyywtllepgdti
tfeatgnliapwyafalnrgsgsgiitsdapvhdcntkcqtphgainsslpfqnihpvti
gecpkyvrstklrmatglrnipsrq

  • Chain 'M':
    Sequence, based on SEQRES records: (download) 
    >2wrgM (M:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitnkvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldiwtynaellvllenertldfhdsnvrnlye
kvksqlknnakeigngcfefyhkcddacmesvrngtydypkyseesklnreeidgvkles
mgvyqilaiystvasslvllvslgaisfwmcsngslqcrici

    Sequence, based on observed residues (ATOM records): (download) 
    >2wrgM (M:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitnkvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldiwtynaellvllenertldfhdsnvrnlye
kvksqlknnakeigngcfefyhkcddacmesvrngtydypk