PDB entry 2wql
View 2wql on RCSB PDB site
Description: crystal structure of the major carrot allergen dau c 1
Class: allergen
Keywords: pathogenesis-related protein, allergen, plant defense
Deposited on
2009-08-24, released
2009-09-01
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-06-02.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.22228
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: major allergen dau c 1
Species: DAUCUS CAROTA [TaxId:4039]
Database cross-references and differences (RAF-indexed):
- Uniprot O04298 (Start-153)
- engineered mutation (35)
- engineered mutation (65)
- engineered mutation (79)
- engineered mutation (101)
Domains in SCOPe 2.08: d2wqla_ - Chain 'B':
Compound: major allergen dau c 1
Species: DAUCUS CAROTA [TaxId:4039]
Database cross-references and differences (RAF-indexed):
- Uniprot O04298 (Start-153)
- engineered mutation (35)
- engineered mutation (65)
- engineered mutation (79)
- engineered mutation (101)
Domains in SCOPe 2.08: d2wqlb_ - Chain 'C':
Compound: major allergen dau c 1
Species: DAUCUS CAROTA [TaxId:4039]
Database cross-references and differences (RAF-indexed):
- Uniprot O04298 (Start-153)
- engineered mutation (35)
- engineered mutation (65)
- engineered mutation (79)
- engineered mutation (101)
Domains in SCOPe 2.08: d2wqlc_ - Chain 'D':
Compound: major allergen dau c 1
Species: DAUCUS CAROTA [TaxId:4039]
Database cross-references and differences (RAF-indexed):
- Uniprot O04298 (Start-153)
- engineered mutation (35)
- engineered mutation (65)
- engineered mutation (79)
- engineered mutation (101)
Domains in SCOPe 2.08: d2wqld_ - Heterogens: P4C, PEG, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2wqlA (A:)
mgaqshsleitssvsaekifsgivldvdtvipkaatgayksvevkgdggagtvriitlpe
gspittmtvrtdavnkealsydstvidgdillgfiesiethmvvvptadggsitkttaif
htkgdavvpeenikfadaqntalfkaieaylian
Sequence, based on observed residues (ATOM records): (download)
>2wqlA (A:)
aqshsleitssvsaekifsgivldvdtvipkaatgayksvevkgdggagtvriitlpegs
pittmtvrtdavnkealsydstvidgdillgfiesiethmvvvptadggsitkttaifht
kgdavvpeenikfadaqntalfkaieaylian
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2wqlB (B:)
mgaqshsleitssvsaekifsgivldvdtvipkaatgayksvevkgdggagtvriitlpe
gspittmtvrtdavnkealsydstvidgdillgfiesiethmvvvptadggsitkttaif
htkgdavvpeenikfadaqntalfkaieaylian
Sequence, based on observed residues (ATOM records): (download)
>2wqlB (B:)
aqshsleitssvsaekifsgivldvdtvipkaatgayksvevkgdggagtvriitlpegs
pittmtvrtdavnkealsydstvidgdillgfiesiethmvvvptadggsitkttaifht
kgdavvpeenikfadaqntalfkaieaylian
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2wqlC (C:)
mgaqshsleitssvsaekifsgivldvdtvipkaatgayksvevkgdggagtvriitlpe
gspittmtvrtdavnkealsydstvidgdillgfiesiethmvvvptadggsitkttaif
htkgdavvpeenikfadaqntalfkaieaylian
Sequence, based on observed residues (ATOM records): (download)
>2wqlC (C:)
aqshsleitssvsaekifsgivldvdtvipkaatgayksvevkgdggagtvriitlpegs
pittmtvrtdavnkealsydstvidgdillgfiesiethmvvvptadggsitkttaifht
kgdavvpeenikfadaqntalfkaieaylian
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2wqlD (D:)
mgaqshsleitssvsaekifsgivldvdtvipkaatgayksvevkgdggagtvriitlpe
gspittmtvrtdavnkealsydstvidgdillgfiesiethmvvvptadggsitkttaif
htkgdavvpeenikfadaqntalfkaieaylian
Sequence, based on observed residues (ATOM records): (download)
>2wqlD (D:)
aqshsleitssvsaekifsgivldvdtvipkaatgayksvevkgdggagtvriitlpegs
pittmtvrtdavnkealsydstvidgdillgfiesiethmvvvptadggsitkttaifht
kgdavvpeenikfadaqntalfkaieaylian