PDB entry 2wnv

View 2wnv on RCSB PDB site
Description: Complex between C1q globular heads and deoxyribose
Class: immune system
Keywords: immune system, c1q, secreted, collagen, complement, recognition, disulfide bond, innate immunity, immune response, pyrrolidone carboxylic acid, disease mutation, complement pathway, glycoprotein, hydroxylation
Deposited on 2009-07-20, released 2010-05-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 1.25 Å
R-factor: N/A
AEROSPACI score: 0.69 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: complement c1q subcomponent subunit a
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2wnva_
  • Chain 'B':
    Compound: complement c1q subcomponent subunit b
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2wnvb_
  • Chain 'C':
    Compound: complement c1q subcomponent subunit c
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2wnvc_
  • Chain 'D':
    Compound: complement c1q subcomponent subunit a
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2wnvd_
  • Chain 'E':
    Compound: complement c1q subcomponent subunit b
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2wnve_
  • Chain 'F':
    Compound: complement c1q subcomponent subunit c
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2wnvf_
  • Heterogens: NAG, CA, 2DR, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2wnvA (A:)
qprpafsairrnppmggnvvifdtvitnqeepyqnhsgrfvctvpgyyyftfqvlsqwei
clsivsssrgqvrrslgfcdttnkglfqvvsggmvlqlqqgdqvwvekdpkkghiyqgse
adsvfsgflifpsa

    Sequence, based on observed residues (ATOM records): (download) 
    >2wnvA (A:)
qprpafsairrnppgnvvifdtvitnqeepyqnhsgrfvctvpgyyyftfqvlsqweicl
sivsssrgqvrrslgfcdttnkglfqvvsggmvlqlqqgdqvwvekdpkkghiyqgsead
svfsgflifpsa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2wnvB (B:)
atqkiafsatrtinvplrrdqtirfdhvitnmnnnyeprsgkftckvpglyyftyhassr
gnlcvnlmrgreraqkvvtfcdyayntfqvttggmvlkleqgenvflqatdknsllgmeg
ansifsgfllfpdmea

    Sequence, based on observed residues (ATOM records): (download) 
    >2wnvB (B:)
tqkiafsatrtivplrrdqtirfdhvitnmnnnyeprsgkftckvpglyyftyhassrgn
lcvnlmrgreraqkvvtfcdyayntfqvttggmvlkleqgenvflqatdknsllgmegan
sifsgfllfpdm

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2wnvC (C:)
kqkfqsvftvtrqthqppapnslirfnavltnpqgdydtstgkftckvpglyyfvyhash
tanlcvllyrsgvkvvtfcghtsktnqvnsggvllrlqvgeevwlavndyydmvgiqgsd
svfsgfllfpd

    Sequence, based on observed residues (ATOM records): (download) 
    >2wnvC (C:)
kfqsvftvtrqthqppapnslirfnavltnpqgdydtstgkftckvpglyyfvyhashta
nlcvllyrsgvkvvtfcghtsktnqvnsggvllrlqvgeevwlavndyydmvgiqgsdsv
fsgfllfpd

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2wnvD (D:)
qprpafsairrnppmggnvvifdtvitnqeepyqnhsgrfvctvpgyyyftfqvlsqwei
clsivsssrgqvrrslgfcdttnkglfqvvsggmvlqlqqgdqvwvekdpkkghiyqgse
adsvfsgflifpsa

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2wnvE (E:)
atqkiafsatrtinvplrrdqtirfdhvitnmnnnyeprsgkftckvpglyyftyhassr
gnlcvnlmrgreraqkvvtfcdyayntfqvttggmvlkleqgenvflqatdknsllgmeg
ansifsgfllfpdmea

    Sequence, based on observed residues (ATOM records): (download) 
    >2wnvE (E:)
qkiafsatrtiplrrdqtirfdhvitnmnnnyeprsgkftckvpglyyftyhassrgnlc
vnlmrgreraqkvvtfcdyayntfqvttggmvlkleqgenvflqatdknsllgmegansi
fsgfllfpdm

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2wnvF (F:)
kqkfqsvftvtrqthqppapnslirfnavltnpqgdydtstgkftckvpglyyfvyhash
tanlcvllyrsgvkvvtfcghtsktnqvnsggvllrlqvgeevwlavndyydmvgiqgsd
svfsgfllfpd

    Sequence, based on observed residues (ATOM records): (download) 
    >2wnvF (F:)
kfqsvftvtrqthqppapnslirfnavltnpqgdydtstgkftckvpglyyfvyhashta
nlcvllyrsgvkvvtfcghtsktnqvnsggvllrlqvgeevwlavndyydmvgiqgsdsv
fsgfllfpd