PDB entry 2wnu
View 2wnu on RCSB PDB site
Description: complex between c1q globular heads and heparan sulfate
Class: immune system
Keywords: collagen, innate immunity, immune response, pyrrolidone carboxylic acid, immune system, disease mutation, complement pathway, glycoprotein, hydroxylation
Deposited on
2009-07-20, released
2010-05-26
The last revision prior to the SCOPe 2.02 freeze date was dated
2010-07-14, with a file datestamp of
2010-07-09.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.20064
AEROSPACI score: 0.35
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: complement c1q subcomponent subunit a
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d2wnua_ - Chain 'B':
Compound: complement c1q subcomponent subunit b
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d2wnub_ - Chain 'C':
Compound: complement c1q subcomponent subunit c
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d2wnuc_ - Chain 'D':
Compound: complement c1q subcomponent subunit a
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d2wnud_ - Chain 'E':
Compound: complement c1q subcomponent subunit b
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d2wnue_ - Chain 'F':
Compound: complement c1q subcomponent subunit c
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d2wnuf_ - Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2wnuA (A:)
qprpafsairrnppmggnvvifdtvitnqeepyqnhsgrfvctvpgyyyftfqvlsqwei
clsivsssrgqvrrslgfcdttnkglfqvvsggmvlqlqqgdqvwvekdpkkghiyqgse
adsvfsgflifpsa
Sequence, based on observed residues (ATOM records): (download)
>2wnuA (A:)
qprpafsairrnppmggnvvifdtvitnqeepyqnhsgrfvctvpgyyyftfqvlsqwei
clsivsssrgqvrrslgfcdttnkglfqvvsggmvlqlqqgdqvwvekdpkkghiyqgse
adsvfsgflifps
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2wnuB (B:)
atqkiafsatrtinvplrrdqtirfdhvitnmnnnyeprsgkftckvpglyyftyhassr
gnlcvnlmrgreraqkvvtfcdyayntfqvttggmvlkleqgenvflqatdknsllgmeg
ansifsgfllfpdmea
Sequence, based on observed residues (ATOM records): (download)
>2wnuB (B:)
tqkiafsatrtinvplrrdqtirfdhvitnmnnnyeprsgkftckvpglyyftyhassrg
nlcvnlmrgreraqkvvtfcdyayntfqvttggmvlkleqgenvflqatdknsllgmega
nsifsgfllfpdm
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2wnuC (C:)
kqkfqsvftvtrqthqppapnslirfnavltnpqgdydtstgkftckvpglyyfvyhash
tanlcvllyrsgvkvvtfcghtsktnqvnsggvllrlqvgeevwlavndyydmvgiqgsd
svfsgfllfpd
Sequence, based on observed residues (ATOM records): (download)
>2wnuC (C:)
kfqsvftvtrqthqppapnslirfnavltnpqgdydtstgkftckvpglyyfvyhashta
nlcvllyrsgvkvvtfcghtsktnqvnsggvllrlqvgeevwlavndyydmvgiqgsdsv
fsgfllfpd
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2wnuD (D:)
qprpafsairrnppmggnvvifdtvitnqeepyqnhsgrfvctvpgyyyftfqvlsqwei
clsivsssrgqvrrslgfcdttnkglfqvvsggmvlqlqqgdqvwvekdpkkghiyqgse
adsvfsgflifpsa
Sequence, based on observed residues (ATOM records): (download)
>2wnuD (D:)
qprpafsairrnppmggnvvifdtvitnqeepyqnhsgrfvctvpgyyyftfqvlsqwei
clsivsssrgqvrrslgfcdttnkglfqvvsggmvlqlqqgdqvwvekdpkkghiyqgse
adsvfsgflifps
- Chain 'E':
Sequence, based on SEQRES records: (download)
>2wnuE (E:)
atqkiafsatrtinvplrrdqtirfdhvitnmnnnyeprsgkftckvpglyyftyhassr
gnlcvnlmrgreraqkvvtfcdyayntfqvttggmvlkleqgenvflqatdknsllgmeg
ansifsgfllfpdmea
Sequence, based on observed residues (ATOM records): (download)
>2wnuE (E:)
tqkiafsatrtinvplrrdqtirfdhvitnmnnnyeprsgkftckvpglyyftyhassrg
nlcvnlmrgreraqkvvtfcdyayntfqvttggmvlkleqgenvflqatdknsllgmega
nsifsgfllfpdm
- Chain 'F':
Sequence, based on SEQRES records: (download)
>2wnuF (F:)
kqkfqsvftvtrqthqppapnslirfnavltnpqgdydtstgkftckvpglyyfvyhash
tanlcvllyrsgvkvvtfcghtsktnqvnsggvllrlqvgeevwlavndyydmvgiqgsd
svfsgfllfpd
Sequence, based on observed residues (ATOM records): (download)
>2wnuF (F:)
kfqsvftvtrqthqppapnslirfnavltnpqgdydtstgkftckvpglyyfvyhashta
nlcvllyrsgvkvvtfcghtsktnqvnsggvllrlqvgeevwlavndyydmvgiqgsdsv
fsgfllfpd