PDB entry 2wlv

View 2wlv on RCSB PDB site
Description: Structure of the N-terminal capsid domain of HIV-2
Class: viral protein
Keywords: viral protein, RNA-binding, capsid protein, viral nucleoprotein, hiv, aids, hiv-2, hiv-1
Deposited on 2009-06-26, released 2009-09-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-03-12, with a file datestamp of 2014-03-07.
Experiment type: XRAY
Resolution: 1.25 Å
R-factor: 0.15456
AEROSPACI score: 0.71 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: gag polyprotein
    Species: HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 (ISOLATE D194) [TaxId:11713]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q76929 (0-143)
      • conflict (7)
      • conflict (109)
    Domains in SCOPe 2.08: d2wlva_
  • Chain 'B':
    Compound: gag polyprotein
    Species: HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 (ISOLATE D194) [TaxId:11713]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q76929 (0-143)
      • conflict (7)
      • conflict (26-27)
      • conflict (109)
    Domains in SCOPe 2.08: d2wlvb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2wlvA (A:)
    pvqhvggtythiplsprtlnawvklveekkfgaevvpgfqalsegctpydinqmlncvgd
    hqaamqiireiineeaaewdvqhpipgplpagqlreprgsdiagttstveeqiqwmfrpq
    npvpvgniyrrwiqiglqkcvrmy
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2wlvB (B:)
    pvqhvggtythiplsprtlnawvklvqqkkfgaevvpgfqalsegctpydinqmlncvgd
    hqaamqiireiineeaaewdvqhpipgplpagqlreprgsdiagttstveeqiqwmfrpq
    npvpvgniyrrwiqiglqkcvrmy