PDB entry 2wky

View 2wky on RCSB PDB site
Description: Crystal structure of the ligand-binding core of GluR5 in complex with the agonist 4-AHCP
Class: membrane protein
Keywords: membrane protein, synapse, membrane, receptor, transport, ion channel, RNA editing, glycoprotein, cell junction, ionotropic glutamate receptor, alternative splicing, postsynaptic cell membrane, ionic channel, cell membrane, ion transport, transmembrane, phosphoprotein, ligand-binding core
Deposited on 2009-06-18, released 2009-07-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-08-09, with a file datestamp of 2017-08-04.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate receptor, ionotropic kainate 1
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22756 (118-257)
      • see remark 999 (33)
      • linker (116-117)
    Domains in SCOPe 2.08: d2wkya_
  • Chain 'B':
    Compound: Glutamate receptor, ionotropic kainate 1
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22756 (118-End)
      • see remark 999 (33)
      • linker (116-117)
    Domains in SCOPe 2.08: d2wkyb_
  • Heterogens: CL, IBC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2wkyA (A:)
    ganrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgk
    ygaqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpi
    dsaddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrv
    lttdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqee
    gklhmmkekwwrgngcpe
    

    Sequence, based on observed residues (ATOM records): (download)
    >2wkyA (A:)
    rtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgkyga
    qndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpidsa
    ddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrvltt
    dyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqeegkl
    hmmkekwwrgngcpe
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2wkyB (B:)
    ganrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgk
    ygaqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpi
    dsaddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrv
    lttdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqee
    gklhmmkekwwrgngcpe
    

    Sequence, based on observed residues (ATOM records): (download)
    >2wkyB (B:)
    rtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgkyga
    qndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpidsa
    ddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrvltt
    dyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqeegkl
    hmmkekwwrgngc