PDB entry 2wjy

View 2wjy on RCSB PDB site
Description: crystal structure of the complex between human nonsense mediated decay factors upf1 and upf2 orthorhombic form
Deposited on 2009-06-01, released 2009-07-07
The last revision was dated 2011-07-13, with a file datestamp of 2011-06-02.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.19777
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Regulator of nonsense transcripts 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2wjyA (A:)
    tkdlpihacsycgihdpacvvycntskkwfcngrgntsgshivnhlvrakckevtlhkdg
    plgetvlecyncgcrnvfllgfipakadsvvvllcrqpcasqsslkdinwdssqwqpliq
    drcflswlvkipseqeqlrarqitaqqinkleelwkenpsatledlekpgvdeepqhvll
    ryedayqyqnifgplvkleadydkklkesqtqdnitvrwdlglnkkriayftlpktdsdm
    rlmqgdeiclrykgdlaplwkgighvikvpdnygdeiaielrssvgapvevthnfqvdfv
    wkstsfdrmqsalktfavdetsvsgyiyhkllghevedviikcqlpkrftaqglpdlnhs
    qvyavktvlqrplsliqgppgtgktvtsativyhlarqgngpvlvcapsniavdqlteki
    hqtglkvvrlcaksreaidspvsflalhnqirnmdsmpelqklqqlkdetgelssadekr
    yralkrtaerellmnadvicctcvgagdprlakmqfrsilidestqatepecmvpvvlga
    kqlilvgdhcqlgpvvmckkaakaglsqslferlvvlgirpirlqvqyrmhpalsafpsn
    ifyegslqngvtaadrvkkgfdfqwpqpdkpmffyvtqgqeeiassgtsylnrteaanve
    kittkllkagakpdqigiitpyegqrsylvqymqfsgslhtklyqeveiasvdafqgrek
    dfiilscvranehqgigflndprrlnvaltrarygviivgnpkalskqplwnhllnyyke
    qkvlvegplnnlreslmqfs
    

    Sequence, based on observed residues (ATOM records):
    >2wjyA (A:)
    kdlpihacsycgihdpacvvycntskkwfcngrgntsgshivnhlvrakckevtlhkdgp
    lgetvlecyncgcrnvfllgfipvvvllcrqpcasqsswqpliqdrcflswlvkipseqe
    qlrarqitaqqinkleelwkenpsatledepqhvllryedayqyqnifgplvkleadydk
    klkesqtqdnitvrwdlglnkkriayftlpktdsrlmqgdeiclrykgdlaplwkgighv
    ikvpdnygdeiaielrssvgapvevthnfqvdfvwkstsfdrmqsalktfavdetsvsgy
    iyhkllghevedviikcqlpkrftaqglpdlnhsqvyavktvlqrplsliqgppgtgktv
    tsativyhlarqgngpvlvcapsniavdqltekihqtglkvvrlcaksreaidspvsfla
    lhnqirnmdsmpelqklqqlkdetgelssadekryralkrtaerellmnadvicctcvga
    gdprlakmqfrsilidestqatepecmvpvvlgakqlilvgdhcqlgpvvmckkaakagl
    sqslferlvvlgirpirlqvqyrmhpalsafpsnifyegslqngvtaadrvkkgfdfqwp
    qpdkpmffyvtqgqeeiassgtsylnrteaanvekittkllkagakpdqigiitpyegqr
    sylvqymqfsgslhtklyqeveiasvdafqgrekdfiilscvranehqgigflndprrln
    valtrarygviivgnpkalskqplwnhllnyykeqkvlvegplnnlreslmqf