PDB entry 2wjm

View 2wjm on RCSB PDB site
Description: Lipidic sponge phase crystal structure of the photosynthetic reaction centre from Blastochloris viridis (low dose)
Class: photosynthesis
Keywords: reaction centre, photosynthesis, membrane protein, lipids, monoolein, posttranslational modification, thioether bond, ubiquinone, lipidic sponge phase
Deposited on 2009-05-27, released 2009-09-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-09-25, with a file datestamp of 2019-09-20.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'C':
    Compound: Photosynthetic reaction center cytochrome c subunit
    Species: RHODOPSEUDOMONAS VIRIDIS [TaxId:1079]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2wjmc_
  • Chain 'H':
    Compound: reaction center protein h chain
    Species: RHODOPSEUDOMONAS VIRIDIS [TaxId:1079]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2wjmh1, d2wjmh2
  • Chain 'L':
    Compound: reaction center protein l chain
    Species: RHODOPSEUDOMONAS VIRIDIS [TaxId:1079]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2wjml_
  • Chain 'M':
    Compound: reaction center protein m chain
    Species: RHODOPSEUDOMONAS VIRIDIS [TaxId:1079]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2wjmm_
  • Heterogens: HEC, DGA, BCB, BPB, MPG, FE2, MQ7, NS5, PO4, HOH

PDB Chain Sequences:

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2wjmC (C:)
cfepppatttqtgfrglsmgevlhpatvkakkerdaqyppalaavkaegppvsqvyknvk
vlgnlteaeflrtmtaitewvspqegctychdennlaseakypyvvarrmlemtraintn
wtqhvaqtgvtcytchrgtplppyvryleptlplnnretpthvervetrsgyvvrlakyt
aysalnydpftmflandkrqvrvvpqtalplvgvsrgkerrplsdayatfalmmsisdsl
gtnctfchnaqtfeswgkkstpqraiawwgirmvrdlnmnylaplnaslpasrlgrqgea
pqadcrtchqgvtkplfgasrlkdypelgpikaaak

    Sequence, based on observed residues (ATOM records): (download) 
    >2wjmC (C:)
cfepppatttqtgfrglsmgevlhpatvkakkerdaqyppalaavkaegppvsqvyknvk
vlgnlteaeflrtmtaitewvspqegctychdennlaseakypyvvarrmlemtraintn
wtqhvaqtgvtcytchrgtplppyvryleptlplnnretpthvervetrsgyvvrlakyt
aysalnydpftmflandkrqvrvvpqtalplvgvsrgkerrplsdayatfalmmsisdsl
gtnctfchnaqtfeswgkkstpqraiawwgirmvrdlnmnylaplnaslpasrlgrqgea
pqadcrtchqgvtkplfgasrlkdypelgpik

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2wjmH (H:)
myhgalaqhldiaqlvwyaqwlviwtvvllylrredrregyplveplglvklapedgqvy
elpypktfvlphggtvtvprrrpetrelklaqtdgfegaplqptgnplvdavgpasyaer
aevvdatvdgkakivplrvatdfsiaegdvdprglpvvaadgveagtvtdlwvdrsehyf
rylelsvagsartaliplgfcdvkkdkivvtsilseqfanvprlqsrdqitlreedkvsa
yyaggllyatperaesll

    Sequence, based on observed residues (ATOM records): (download) 
    >2wjmH (H:)
myhgalaqhldiaqlvwyaqwlviwtvvllylrredrregyplveelpypktfvlphggt
vtvprrrpetrelklaqtdgfegaplqptgnplvdavgpasyaeraevvdatvdgkakiv
plrvatdfsiaegdvdprglpvvaadgveagtvtdlwvdrsehyfrylelsvagsartal
iplgfcdvkkdkivvtsilseqfanvprlqsrdqitlreedkvsayyaggllyatperae
sll

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >2wjmL (L:)
mallsferkyrvrggtliggdlfdfwvgpyfvgffgvsaiffiflgvsligyaasqgptw
dpfaisinppdlkyglgaaplleggfwqaitvcalgafiswmlreveisrklgigwhvpl
afcvpifmfcvlqvfrplllgswghafpygilshldwvnnfgyqylnwhynpghmssvsf
lfvnamalglhgglilsvanpgdgdkvktaehenqyfrdvvgysigalsihrlglflasn
ifltgafgtiasgpfwtrgwpewwgwwldipfws

    Sequence, based on observed residues (ATOM records): (download) 
    >2wjmL (L:)
allsferkyrvrggtliggdlfdfwvgpyfvgffgvsaiffiflgvsligyaasqgptwd
pfaisinppdlkyglgaaplleggfwqaitvcalgafiswmlreveisrklgigwhvpla
fcvpifmfcvlqvfrplllgswghafpygilshldwvnnfgyqylnwhynpghmssvsfl
fvnamalglhgglilsvanpgdgdkvktaehenqyfrdvvgysigalsihrlglflasni
fltgafgtiasgpfwtrgwpewwgwwldipfws

  • Chain 'M':
    Sequence, based on SEQRES records: (download) 
    >2wjmM (M:)
madyqtiytqiqargphitvsgewgdndrvgkpfysywlgkigdaqigpiylgasgiaaf
afgstailiilfnmaaevhfdplqffrqffwlglyppkaqygmgipplhdggwwlmaglf
mtlslgswwirvysraralglgthiawnfaaaiffvlcigcihptlvgswsegvpfgiwp
hidwltafsirygnfyycpwhgfsigfaygcgllfaahgatilavarfggdreieqitdr
gtaveraalfwrwtigfnatiesvhrwgwffslmvmvsasvgilltgtfvdnwylwcvkh
gaapdypaylpatpdpaslpgapk

    Sequence, based on observed residues (ATOM records): (download) 
    >2wjmM (M:)
adyqtiytqiqargphitvsgewgdndrvgkpfysywlgkigdaqigpiylgasgiaafa
fgstailiilfnmaaevhfdplqffrqffwlglyppkaqygmgipplhdggwwlmaglfm
tlslgswwirvysraralglgthiawnfaaaiffvlcigcihptlvgswsegvpfgiwph
idwltafsirygnfyycpwhgfsigfaygcgllfaahgatilavarfggdreieqitdrg
taveraalfwrwtigfnatiesvhrwgwffslmvmvsasvgilltgtfvdnwylwcvkhg
aapdypaylpatpdpaslpgapk