PDB entry 2whx

View 2whx on RCSB PDB site
Description: a second conformation of the ns3 protease-helicase from dengue virus
Deposited on 2009-05-07, released 2010-04-07
The last revision was dated 2011-07-13, with a file datestamp of 2011-06-02.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.23031
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Serine protease/NTPase/helicase NS3
    Species: DENGUE VIRUS 4 [TaxId:11070]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q2YHF0 (Start-617)
      • conflict (142)
      • conflict (249)
      • conflict (291)
      • conflict (320)
      • conflict (380)
      • conflict (479)
  • Chain 'C':
    Compound: Serine protease subunit NS2B
    Species: DENGUE VIRUS 4 [TaxId:11070]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ADP, MN, CL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2whxA (A:)
    sgalwdvpspaaaqkatltegvyrimqrglfgktqvgvgihmegvfhtmwhvtrgsvich
    esgrlepswadvrndmisygggwrlgdkwdkeedvqvlaiepgknpkhvqtkpglfktlt
    geigavtldfkpgtsgspiinkkgkviglygngvvtksgdyvsaitqaerigepdyevde
    difrkkrltimdlhpgagktkrilpsivrealkrrlrtlilaptrvvaaemeealrglpi
    ryqtpavksdhtgreivdlmchatfttrllsstrvpnynlivmdeahftdpcsvaargyi
    strvemgeaaaifmtatppgstdpfpqsnspiediereiperswntgfdwitdyqgktvw
    fvpsikagndianclrksgkrviqlsrktfdteypktkltdwdfvvttdisemganfrag
    rvidprrclkpviltdgpervilagpipvtpasaaqrrgrigrnpaqeddqyvfsgdplk
    ndedhahwteakmlldniytpegiiptlfgperektqaidgefrlrgeqrktfvelmrrg
    dlpvwlsykvasagisykdrewcftgernnqileenmeveiwtregekkklrpkwldarv
    yadpmalkdfkefasgrk
    

    Sequence, based on observed residues (ATOM records):
    >2whxA (A:)
    gvyrimqrglfgktqvgvgihmegvfhtmwhvtrgsvicherlepswadvrndmisyggg
    wrlgdkwdkeedvqvlaiepgknpkhvqtkpglfeigavtldfkpgtsgspiinkkgkvi
    glygnvsaitqaerigepdyevdedifrkkrltimdlhpgagktkrilpsivrealkrrl
    rtlilaptrvvaaemeealrglpiryqtpavksdhtgreivdlmchatfttrllsstrvp
    nynlivmdeahftdpcsvaargyistrvemgeaaaifmtatppgstdpfpqsnspiedie
    reiperswntgfdwitdyqgktvwfvpsikagndianclrksgkrviqlsrktfdteypk
    tkltdwdfvvttdisemganfragrvidprrclkpviltdgpervilagpipvtpasaaq
    rrgrigrnpaqeddqyvfsgdplkndedhahwteakmlldniytpegiiptlfgperekt
    qaidgefrlrgeqrktfvelmrrgdlpvwlsykvasagisykdrewcftgernnqileen
    meveiwtregekkklrpkwldarvyadpmalkdfkefasgrk
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >2whxC (C:)
    adlslekaanvqwd