PDB entry 2wfs

View 2wfs on RCSB PDB site
Description: fitting of influenza virus np structure into the 9-fold symmetryzed cryoem reconstruction of an active rnp particle.
Deposited on 2009-04-15, released 2009-07-07
The last revision was dated 2019-10-23, with a file datestamp of 2019-10-18.
Experiment type: EM
Resolution: 12 Å
R-factor: N/A
AEROSPACI score: -0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS [TaxId:11320]
    Gene: NP
    Database cross-references and differences (RAF-indexed):
    • PDB 2WFS
  • Chain 'B':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS [TaxId:11320]
    Gene: NP
    Database cross-references and differences (RAF-indexed):
    • PDB 2WFS
  • Chain 'C':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS [TaxId:11320]
    Gene: NP
    Database cross-references and differences (RAF-indexed):
    • PDB 2WFS
  • Chain 'D':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS [TaxId:11320]
    Gene: NP
    Database cross-references and differences (RAF-indexed):
    • PDB 2WFS
  • Chain 'E':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS [TaxId:11320]
    Gene: NP
    Database cross-references and differences (RAF-indexed):
    • PDB 2WFS
  • Chain 'F':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS [TaxId:11320]
    Gene: NP
    Database cross-references and differences (RAF-indexed):
    • PDB 2WFS
  • Chain 'G':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS [TaxId:11320]
    Gene: NP
    Database cross-references and differences (RAF-indexed):
    • PDB 2WFS
  • Chain 'H':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS [TaxId:11320]
    Gene: NP
    Database cross-references and differences (RAF-indexed):
    • PDB 2WFS
  • Chain 'I':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS [TaxId:11320]
    Gene: NP
    Database cross-references and differences (RAF-indexed):
    • PDB 2WFS

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2wfsA (A:)
    rsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermv
    lsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriwrqanngd
    dataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaagaavkgvg
    tmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvdqvresrn
    pgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvgidpfrll
    qnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklstrgvqias
    nenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpfdrptima
    aftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsy
    ffgdnaeeydnlehhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >2wfsA (A:)
    nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
    vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
    dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
    fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
    dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
    tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntssgqisiqptfsv
    qrnlpfdrptimaasdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsn
    egsyff
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2wfsB (B:)
    rsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermv
    lsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriwrqanngd
    dataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaagaavkgvg
    tmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvdqvresrn
    pgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvgidpfrll
    qnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklstrgvqias
    nenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpfdrptima
    aftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsy
    ffgdnaeeydnlehhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >2wfsB (B:)
    nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
    vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
    dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
    fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
    dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
    tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntssgqisiqptfsv
    qrnlpfdrptimaasdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsn
    egsyff
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2wfsC (C:)
    rsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermv
    lsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriwrqanngd
    dataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaagaavkgvg
    tmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvdqvresrn
    pgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvgidpfrll
    qnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklstrgvqias
    nenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpfdrptima
    aftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsy
    ffgdnaeeydnlehhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >2wfsC (C:)
    nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
    vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
    dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
    fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
    dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
    tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntssgqisiqptfsv
    qrnlpfdrptimaasdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsn
    egsyff
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2wfsD (D:)
    rsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermv
    lsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriwrqanngd
    dataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaagaavkgvg
    tmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvdqvresrn
    pgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvgidpfrll
    qnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklstrgvqias
    nenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpfdrptima
    aftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsy
    ffgdnaeeydnlehhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >2wfsD (D:)
    nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
    vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
    dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
    fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
    dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
    tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntssgqisiqptfsv
    qrnlpfdrptimaasdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsn
    egsyff
    

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2wfsE (E:)
    rsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermv
    lsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriwrqanngd
    dataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaagaavkgvg
    tmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvdqvresrn
    pgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvgidpfrll
    qnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklstrgvqias
    nenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpfdrptima
    aftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsy
    ffgdnaeeydnlehhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >2wfsE (E:)
    nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
    vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
    dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
    fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
    dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
    tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntssgqisiqptfsv
    qrnlpfdrptimaasdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsn
    egsyff
    

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2wfsF (F:)
    rsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermv
    lsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriwrqanngd
    dataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaagaavkgvg
    tmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvdqvresrn
    pgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvgidpfrll
    qnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklstrgvqias
    nenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpfdrptima
    aftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsy
    ffgdnaeeydnlehhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >2wfsF (F:)
    nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
    vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
    dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
    fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
    dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
    tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntssgqisiqptfsv
    qrnlpfdrptimaasdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsn
    egsyff
    

  • Chain 'G':
    Sequence, based on SEQRES records:
    >2wfsG (G:)
    rsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermv
    lsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriwrqanngd
    dataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaagaavkgvg
    tmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvdqvresrn
    pgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvgidpfrll
    qnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklstrgvqias
    nenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpfdrptima
    aftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsy
    ffgdnaeeydnlehhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >2wfsG (G:)
    nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
    vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
    dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
    fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
    dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
    tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntssgqisiqptfsv
    qrnlpfdrptimaasdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsn
    egsyff
    

  • Chain 'H':
    Sequence, based on SEQRES records:
    >2wfsH (H:)
    rsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermv
    lsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriwrqanngd
    dataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaagaavkgvg
    tmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvdqvresrn
    pgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvgidpfrll
    qnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklstrgvqias
    nenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpfdrptima
    aftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsy
    ffgdnaeeydnlehhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >2wfsH (H:)
    nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
    vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
    dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
    fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
    dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
    tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntssgqisiqptfsv
    qrnlpfdrptimaasdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsn
    egsyff
    

  • Chain 'I':
    Sequence, based on SEQRES records:
    >2wfsI (I:)
    rsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermv
    lsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriwrqanngd
    dataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaagaavkgvg
    tmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvdqvresrn
    pgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvgidpfrll
    qnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklstrgvqias
    nenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpfdrptima
    aftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsy
    ffgdnaeeydnlehhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >2wfsI (I:)
    nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
    vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
    dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
    fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
    dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
    tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntssgqisiqptfsv
    qrnlpfdrptimaasdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsn
    egsyff