PDB entry 2wd6

View 2wd6 on RCSB PDB site
Description: crystal structure of the variable domain of the streptococcus gordonii surface protein sspb
Deposited on 2009-03-20, released 2009-07-28
The last revision was dated 2018-01-17, with a file datestamp of 2018-01-12.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: agglutinin receptor
    Species: STREPTOCOCCUS GORDONII [TaxId:1302]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: agglutinin receptor
    Species: STREPTOCOCCUS GORDONII [TaxId:1302]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CA, GOL, K, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2wd6A (A:)
eaklakyeadlakykkefaaytaalaeaeskkkqdgylseprsqslnfksepnairtids
svhqygqqeldalvkswgisptnpdrkksraysyfnainsnntyaklvlekdkpvdvtyt
glknssfngkkiskvvytytlketgfndgtkmtmfassdptvtawyndyftstninvkvk
fydeegqlmnltgglvnfsslnrgngsgaidkdaiesvrnfngryipisgssikihenns
ayadssnaekslgarwntsewdttsspnnwygaivgeitqseisfnmassksgniwfafn
sninaigvptkpvaptaptqpmyetekplepapvapsyeneptppvktp

    Sequence, based on observed residues (ATOM records):
    >2wd6A (A:)
ykkefaaytaalaeaeskkkqdgylseprsqslnfksepnairtidssvhqygqqeldal
vkswgisptnpdrkksraysyfnainsnntyaklvlekdkpvdvtytglknssfngkkis
kvvytytlketgfndgtkmtmfassdptvtawyndyftstninvkvkfydeegqlmnltg
glvnfsslnrgngsgaidkdaiesvrnfngryipisgssikihennsayadssnaekslg
arwntsewdttsspnnwygaivgeitqseisfnmassksgniwfafnsninaigvptkpv
ap

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2wd6B (B:)
eaklakyeadlakykkefaaytaalaeaeskkkqdgylseprsqslnfksepnairtids
svhqygqqeldalvkswgisptnpdrkksraysyfnainsnntyaklvlekdkpvdvtyt
glknssfngkkiskvvytytlketgfndgtkmtmfassdptvtawyndyftstninvkvk
fydeegqlmnltgglvnfsslnrgngsgaidkdaiesvrnfngryipisgssikihenns
ayadssnaekslgarwntsewdttsspnnwygaivgeitqseisfnmassksgniwfafn
sninaigvptkpvaptaptqpmyetekplepapvapsyeneptppvktp

    Sequence, based on observed residues (ATOM records):
    >2wd6B (B:)
aytaalaeaeskkkqdgylseprsqslnfksepnairtidssvhqygqqeldalvkswgi
sptnpdrkksraysyfnainsnntyaklvlekdkpvdvtytglknssfngkkiskvvyty
tlketgfndgtkmtmfassdptvtawyndyftstninvkvkfydeegqlmnltgglvnfs
slnrgngsgaidkdaiesvrnfngryipisgssikihennsayadssnaekslgarwnts
ewdttsspnnwygaivgeitqseisfnmassksgniwfafnsninaigvptkp