PDB entry 2w8b

View 2w8b on RCSB PDB site
Description: crystal structure of processed tolb in complex with pal
Class: protein transport/membrane protein
Keywords: protein transport membrane protein complex, tol, pal, tolb, membrane, palmitate, periplasm, bacteriocin transport, transport protein/lipoprotein, cell outer membrane, transport, lipoprotein, cell membrane, outer membrane
Deposited on 2009-01-15, released 2009-02-17
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-10-27, with a file datestamp of 2009-10-23.
Experiment type: XRAY
Resolution: 1.86 Å
R-factor: 0.194
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein tolb
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A855 (0-408)
      • conflict (368)
  • Chain 'B':
    Compound: protein tolb
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: peptidoglycan-associated lipoprotein
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • PDB 2W8B
    • Uniprot P0A912 (Start-109)
    Domains in SCOPe 2.03: d2w8bc_
  • Chain 'D':
    Compound: protein tolb
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: peptidoglycan-associated lipoprotein
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • PDB 2W8B (110-End)
    • Uniprot P0A912 (Start-109)
    Domains in SCOPe 2.03: d2w8be_
  • Chain 'F':
    Compound: protein tolb
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: peptidoglycan-associated lipoprotein
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • PDB 2W8B (110-End)
    • Uniprot P0A912 (Start-109)
    Domains in SCOPe 2.03: d2w8bg_
  • Chain 'H':
    Compound: peptidoglycan-associated lipoprotein
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • PDB 2W8B (110-End)
    • Uniprot P0A912 (Start-109)
    Domains in SCOPe 2.03: d2w8bh_
  • Heterogens: SO4, GOL, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2w8bC (C:)
    mlqqnnivyfdldkydirsdfaqmldahanflrsnpsykvtveghadergtpeynislge
    rranavkmylqgkgvsadqisivsygkekpavlghdeaaysknrravlvylehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2w8bC (C:)
    nnivyfdldkydirsdfaqmldahanflrssykvtveghadergtpeynislgerranav
    kmylqgkgvsadqisivsygkekpavlghdeaaysknrravlvy
    

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >2w8bE (E:)
    mlqqnnivyfdldkydirsdfaqmldahanflrsnpsykvtveghadergtpeynislge
    rranavkmylqgkgvsadqisivsygkekpavlghdeaaysknrravlvylehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2w8bE (E:)
    nnivyfdldkydirsdfaqmldahanflrsnpsykvtveghadergtpeynislgerran
    avkmylqgkgvsadqisivsygkekpavlghdeaaysknrravlvyl
    

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >2w8bG (G:)
    mlqqnnivyfdldkydirsdfaqmldahanflrsnpsykvtveghadergtpeynislge
    rranavkmylqgkgvsadqisivsygkekpavlghdeaaysknrravlvylehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2w8bG (G:)
    qnnivyfdldkydirsdfaqmldahanflrsnpsykvtveghadergtpeynislgerra
    navkmylqgkgvsadqisivsygkekpavlghdeaaysknrravlvyl
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >2w8bH (H:)
    mlqqnnivyfdldkydirsdfaqmldahanflrsnpsykvtveghadergtpeynislge
    rranavkmylqgkgvsadqisivsygkekpavlghdeaaysknrravlvylehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2w8bH (H:)
    qnnivyfdldkydirsdfaqmldahanflrsnpsykvtveghadergtpeynislgerra
    navkmylqgkgvsadqisivsygkekpavlghdeaaysknrravlvyl