PDB entry 2w80

View 2w80 on RCSB PDB site
Description: structure of a complex between neisseria meningitidis factor h binding protein and ccps 6-7 of human complement factor h
Deposited on 2009-01-08, released 2009-03-03
The last revision was dated 2010-01-12, with a file datestamp of 2010-01-08.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: 0.234
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: complement factor h
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P08603 (0-122)
      • variant (81)
  • Chain 'B':
    Compound: complement factor h
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P08603 (0-122)
      • variant (81)
  • Chain 'C':
    Compound: factor h binding protein
    Species: Neisseria meningitidis [TaxId:487]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9JXV4 (Start-249)
    • PDB 2W80 (250-End)
  • Chain 'D':
    Compound: factor h binding protein
    Species: Neisseria meningitidis [TaxId:487]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9JXV4 (Start-249)
    • PDB 2W80 (250-252)
  • Chain 'E':
    Compound: complement factor h
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P08603 (0-122)
      • variant (81)
  • Chain 'F':
    Compound: factor h binding protein
    Species: Neisseria meningitidis [TaxId:487]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9JXV4 (Start-249)
    • PDB 2W80 (250-252)
  • Chain 'G':
    Compound: complement factor h
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P08603 (0-122)
      • variant (81)
  • Chain 'H':
    Compound: factor h binding protein
    Species: Neisseria meningitidis [TaxId:487]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9JXV4 (Start-249)
    • PDB 2W80 (250-252)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >2w80A (A:)
    tlkpcdypdikhgglyhenmrrpyfpvavgkyysyycdehfetpsgsywdhihctqdgws
    pavpclrkcyfpylengynqnhgrkfvqgksidvachpgyalpkaqttvtcmengwsptp
    rci
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >2w80B (B:)
    tlkpcdypdikhgglyhenmrrpyfpvavgkyysyycdehfetpsgsywdhihctqdgws
    pavpclrkcyfpylengynqnhgrkfvqgksidvachpgyalpkaqttvtcmengwsptp
    rci
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2w80C (C:)
    ggvaadigagladaltapldhkdkglqsltldqsvrkneklklaaqgaektygngdslnt
    gklkndkvsrfdfirqievdgqlitlesgefqvykqshsaltafqteqiqdsehsgkmva
    krqfrigdiagehtsfdklpeggratyrgtafgsddaggkltytidfaakqgngkiehlk
    spelnvdlaaadikpdgkrhavisgsvlynqaekgsyslgifggkaqevagsaevktvng
    irhiglaakqele
    

    Sequence, based on observed residues (ATOM records):
    >2w80C (C:)
    gladaltapldhkdkglqsltldqsvrkneklklaaqgaektygngdslntgklkndkvs
    rfdfirqievdgqlitlesgefqvykqshsaltafqteqiqdsehsgkmvakrqfrigdi
    agehtsfdklpeggratyrgtafgsddaggkltytidfaakqgngkiehlkspelnvdla
    aadikpdgkrhavisgsvlynqaekgsyslgifggkaqevagsaevktvngirhiglaak
    qel
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2w80D (D:)
    ggvaadigagladaltapldhkdkglqsltldqsvrkneklklaaqgaektygngdslnt
    gklkndkvsrfdfirqievdgqlitlesgefqvykqshsaltafqteqiqdsehsgkmva
    krqfrigdiagehtsfdklpeggratyrgtafgsddaggkltytidfaakqgngkiehlk
    spelnvdlaaadikpdgkrhavisgsvlynqaekgsyslgifggkaqevagsaevktvng
    irhiglaakqele
    

    Sequence, based on observed residues (ATOM records):
    >2w80D (D:)
    gladaltapldhkdkglqsltldqsvrkneklklaaqgaektygngdslntgklkndkvs
    rfdfirqievdgqlitlesgefqvykqshsaltafqteqiqdsehsgkmvakrqfrigdi
    agehtsfdklpeggratyrgtafgsddaggkltytidfaakqgngkiehlkspelnvdla
    aadikpdgkrhavisgsvlynqaekgsyslgifggkaqevagsaevktvngirhiglaak
    qele
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >2w80E (E:)
    tlkpcdypdikhgglyhenmrrpyfpvavgkyysyycdehfetpsgsywdhihctqdgws
    pavpclrkcyfpylengynqnhgrkfvqgksidvachpgyalpkaqttvtcmengwsptp
    rci
    

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2w80F (F:)
    ggvaadigagladaltapldhkdkglqsltldqsvrkneklklaaqgaektygngdslnt
    gklkndkvsrfdfirqievdgqlitlesgefqvykqshsaltafqteqiqdsehsgkmva
    krqfrigdiagehtsfdklpeggratyrgtafgsddaggkltytidfaakqgngkiehlk
    spelnvdlaaadikpdgkrhavisgsvlynqaekgsyslgifggkaqevagsaevktvng
    irhiglaakqele
    

    Sequence, based on observed residues (ATOM records):
    >2w80F (F:)
    gladaltapldhkdkglqsltldqsvrkneklklaaqgaektygngdslntgklkndkvs
    rfdfirqievdgqlitlesgefqvykqshsaltafqteqiqdsehsgkmvakrqfrigdi
    agehtsfdklpeggratyrgtafgsddaggkltytidfaakqgngkiehlkspelnvdla
    aadikpdgkrhavisgsvlynqaekgsyslgifggkaqevagsaevktvngirhiglaak
    qele
    

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >2w80G (G:)
    tlkpcdypdikhgglyhenmrrpyfpvavgkyysyycdehfetpsgsywdhihctqdgws
    pavpclrkcyfpylengynqnhgrkfvqgksidvachpgyalpkaqttvtcmengwsptp
    rci
    

  • Chain 'H':
    Sequence, based on SEQRES records:
    >2w80H (H:)
    ggvaadigagladaltapldhkdkglqsltldqsvrkneklklaaqgaektygngdslnt
    gklkndkvsrfdfirqievdgqlitlesgefqvykqshsaltafqteqiqdsehsgkmva
    krqfrigdiagehtsfdklpeggratyrgtafgsddaggkltytidfaakqgngkiehlk
    spelnvdlaaadikpdgkrhavisgsvlynqaekgsyslgifggkaqevagsaevktvng
    irhiglaakqele
    

    Sequence, based on observed residues (ATOM records):
    >2w80H (H:)
    gladaltapldhkdkglqsltldqsvrkneklklaaqgaektygngdslntgklkndkvs
    rfdfirqievdgqlitlesgefqvykqshsaltafqteqiqdsehsgkmvakrqfrigdi
    agehtsfdklpeggratyrgtafgsddaggkltytidfaakqgngkiehlkspelnvdla
    aadikpdgkrhavisgsvlynqaekgsyslgifggkaqevagsaevktvngirhiglaak
    qele