SCOPe 2.05: Structural Classification of Proteins

PDB entry 2w3r

View 2w3r on RCSB PDB site
Description: crystal structure of xanthine dehydrogenase (desulfo form) from rhodobacter capsulatus in complex with hypoxanthine
Class: oxidoreductase
Keywords: xdh, gout, iron, 2fe-2s, xanthine, iron-sulfur, molybdenum cofactor, hypoxanthine, metal-binding, oxidoreductase
Deposited on 2008-11-14, released 2008-12-23
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-12-08, with a file datestamp of 2009-12-04.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.242
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Xanthine Dehydrogenase
Species: RHODOBACTER CAPSULATUS [TaxId:1061]
Database cross-references and differences (RAF-indexed):
- Uniprot O54050 (0-461)
  - conflict (25)
Domains in SCOPe 2.05: d2w3ra1, d2w3ra2, d2w3ra3, d2w3ra4
Chain 'B':
Compound: Xanthine Dehydrogenase
Species: RHODOBACTER CAPSULATUS [TaxId:1061]
Database cross-references and differences (RAF-indexed):
- Uniprot O54051 (Start-776)
  - conflict (771)
Domains in SCOPe 2.05: d2w3rb1, d2w3rb2
Chain 'C':
Compound: Xanthine Dehydrogenase
Species: RHODOBACTER CAPSULATUS [TaxId:1061]
Database cross-references and differences (RAF-indexed):
- Uniprot O54050 (0-461)
  - conflict (25)
Domains in SCOPe 2.05: d2w3rc1, d2w3rc2, d2w3rc3, d2w3rc4
Chain 'D':
Compound: Xanthine Dehydrogenase
Species: RHODOBACTER CAPSULATUS [TaxId:1061]
Database cross-references and differences (RAF-indexed):
- Uniprot O54051 (Start-776)
  - conflict (771)
Domains in SCOPe 2.05: d2w3rd1, d2w3rd2
Chain 'E':
Compound: Xanthine Dehydrogenase
Species: RHODOBACTER CAPSULATUS [TaxId:1061]
Database cross-references and differences (RAF-indexed):
- Uniprot O54050 (0-461)
  - conflict (25)
Domains in SCOPe 2.05: d2w3re1, d2w3re2, d2w3re3, d2w3re4
Chain 'F':
Compound: Xanthine Dehydrogenase
Species: RHODOBACTER CAPSULATUS [TaxId:1061]
Database cross-references and differences (RAF-indexed):
- Uniprot O54051 (Start-776)
  - conflict (771)
Domains in SCOPe 2.05: d2w3rf1, d2w3rf2
Chain 'G':
Compound: Xanthine Dehydrogenase
Species: RHODOBACTER CAPSULATUS [TaxId:1061]
Database cross-references and differences (RAF-indexed):
- Uniprot O54050 (0-461)
  - conflict (25)
Domains in SCOPe 2.05: d2w3rg1, d2w3rg2, d2w3rg3, d2w3rg4
Chain 'H':
Compound: Xanthine Dehydrogenase
Species: RHODOBACTER CAPSULATUS [TaxId:1061]
Database cross-references and differences (RAF-indexed):
- Uniprot O54051 (Start-776)
  - conflict (771)
Domains in SCOPe 2.05: d2w3rh1, d2w3rh2
Heterogens: FES, FAD, MPN, CA, HPA, MOM, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2w3rA (A:)
meiafllngetrrvriedptqsllewlraegltgtkegcnegdcgactvmirdaagsrav
naclmmlpqiagkalrtiegiaapdgrlhpvqqamidhhgsqcgfctpgfivsmaaahdr
drkdyddllagnlcrctgyapilraaeaaageppadwlqadaaftlaqlssgvrgqtapa
flpetsdaladwylahpeatliaggtdvslwvtkalrdlpevaflshckdlaqiretpdg
ygigagvtiaalrafaegphpalagllrrfaseqvrqvatiggniangspigdgppalia
mgasltlrrgqerrrmpledffleyrkqdrrpgefvesvtlpksapglrcyklskrfdqd
isavcgclnltlkgskietariafggmagvpkraaafeaaligqdfredtiaaalpllaq
dftplsdmrasaayrmnaaqamalryvrelsgeavavlevmp