PDB entry 2w2h

View 2w2h on RCSB PDB site
Description: structural basis of transcription activation by the cyclin t1-tat-tar rna complex from eiav
Deposited on 2008-10-30, released 2008-12-09
The last revision was dated 2009-10-06, with a file datestamp of 2009-10-02.
Experiment type: XRAY
Resolution: 3.25 Å
R-factor: 0.2451
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cyclin-T1
    Species: Equus caballus [TaxId:9796]
    Database cross-references and differences (RAF-indexed):
    • PDB 2W2H
      • conflict (73)
      • conflict (106)
      • conflict (252)
    • Uniprot Q9XT26 (1-263)
  • Chain 'B':
    Compound: Cyclin-T1
    Species: Equus caballus [TaxId:9796]
    Database cross-references and differences (RAF-indexed):
    • PDB 2W2H (0-0)
      • conflict (73)
      • conflict (106)
      • conflict (252)
    • Uniprot Q9XT26 (1-End)
  • Chain 'C':
    Compound: protein tat
    Species: EQUINE INFECTIOUS ANEMIA VIRUS [TaxId:11665]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: protein tat
    Species: EQUINE INFECTIOUS ANEMIA VIRUS [TaxId:11665]
    Database cross-references and differences (RAF-indexed):
  • Chain 'R':
    Compound: 5'-r(*gp*cp*up*cp*ap*gp*ap*up*cp*up *gp*cp*gp*gp*up*cp*up*gp*ap*gp*c)-3'
    Species: EQUINE INFECTIOUS ANEMIA VIRUS, synthetic [TaxId:11665]
  • Chain 'S':
    Compound: 5'-r(*gp*cp*up*cp*ap*gp*ap*up*cp*up *gp*cp*gp*gp*up*cp*up*gp*ap*gp*c)-3'
    Species: EQUINE INFECTIOUS ANEMIA VIRUS, synthetic [TaxId:11665]
  • Heterogens: MN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2w2hA (A:)
    qrknnnkrwyftreqlenspsrrfgldpdkelsyrqqaanllqdmgqrlnvsqltintai
    vymhrfymiqsftrfhrnsvapaalflaakveeqpkklehvikvahtclhpqeslpdtrs
    eaylqqvqdlvilesiilqtlgfeltidhphthvvkctqlvraskdlaqtsyfmatnslh
    lttfslqytppvvacvcihlackwsnweipvstdgkhwweyvdatvtlelldeltheflq
    ilektpnrlkriwnwracqaakkt
    

    Sequence, based on observed residues (ATOM records):
    >2w2hA (A:)
    rknnnkrwyftreqlenspsrrfgldpdkelsyrqqaanllqdmgqrlnvsqltintaiv
    ymhrfymiqsftrfhrnsvapaalflaakveeqpkklehvikvahtclhpqeslpdtrse
    aylqqvqdlvilesiilqtlgfeltidhphthvvkctqlvraskdlaqtsyfmatnslhl
    ttfslqytppvvacvcihlackwsnweipvstdgkhwweyvdatvtlelldeltheflqi
    lektpnrlkriwnwracqaakkt
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2w2hB (B:)
    qrknnnkrwyftreqlenspsrrfgldpdkelsyrqqaanllqdmgqrlnvsqltintai
    vymhrfymiqsftrfhrnsvapaalflaakveeqpkklehvikvahtclhpqeslpdtrs
    eaylqqvqdlvilesiilqtlgfeltidhphthvvkctqlvraskdlaqtsyfmatnslh
    lttfslqytppvvacvcihlackwsnweipvstdgkhwweyvdatvtlelldeltheflq
    ilektpnrlkriwnwracqaakkt
    

    Sequence, based on observed residues (ATOM records):
    >2w2hB (B:)
    qrknnnkrwyftreqlenspsrrfgldpdkelsyrqqaanllqdmgqrlnvsqltintai
    vymhrfymiqsftrfhrnsvapaalflaakveeqpkklehvikvahtclhpqeslpdtrs
    eaylqqvqdlvilesiilqtlgfeltidhphthvvkctqlvraskdlaqtsyfmatnslh
    lttfslqytppvvacvcihlackwsnweipvstdgkhwweyvdatvtlelldeltheflq
    ilektpnrlkriwnwracqa
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >2w2hC (C:)
    idyldaslrkknkqrlkaiqqgrqpqyll
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >2w2hD (D:)
    idyldaslrkknkqrlkaiqqgrqpqyll
    

  • Chain 'R':
    No sequence available.

  • Chain 'S':
    No sequence available.