PDB entry 2vyt
View 2vyt on RCSB PDB site
Description: The MBT repeats of human SCML2 bind to peptides containing mono methylated lysine.
Class: transcription
Keywords: mono methylated peptides, mbt repeats, transcription, phosphoprotein, alternative splicing, transcription regulation, nucleus, repressor, chromatin, human scml2
Deposited on
2008-07-28, released
2008-08-05
The last revision prior to the SCOPe 2.08 freeze date was dated
2018-01-24, with a file datestamp of
2018-01-19.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: sex comb on midleg-like protein 2
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- PDB 2VYT
- engineered mutation (124)
- Uniprot Q9UQR0 (Start-220)
Domains in SCOPe 2.08: d2vyta1, d2vyta2 - Chain 'B':
Compound: sex comb on midleg-like protein 2
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- PDB 2VYT
- Uniprot Q9UQR0 (Start-220)
Domains in SCOPe 2.08: d2vytb1, d2vytb2 - Heterogens: MLZ, PGE, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2vytA (A:)
gstssvqrddfhweeylketgsisapsecfrqsqippvndfkvgmkleardprnatsvci
atvigitgarlrlrldgsdnrndfwrlvdspdiqpvgtcekegdllqpplgyqmntsswp
mflletlngsemasatlfkkeppkpplnnfkvgmkleaidkknpylicpatigdvkgdev
hitfdgwsgafdywckydsrdifpagwcrltgdvlqppgts
Sequence, based on observed residues (ATOM records): (download)
>2vytA (A:)
rddfhweeylketgsisapsecfrqsqippvndfkvgmkleardprnatsvciatvigit
garlrlrldgsdnrndfwrlvdspdiqpvgtcekegdllqpplgyqmntsswpmflletl
ngsemasatlfkkeppkpplnnfkvgmkleaidkknpylicpatigdvkgdevhitfdgw
sgafdywckydsrdifpagwcrltgdvlqppgts
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2vytB (B:)
gstssvqrddfhweeylketgsisapsecfrqsqippvndfkvgmkleardprnatsvci
atvigitgarlrlrldgsdnrndfwrlvdspdiqpvgtcekegdllqpplgyqmntsswp
mflletlngsemasatlfkkeppkpplnnfkvgmkleaidkknpylicpatigdvkgdev
hitfdgwsgafdywckydsrdifpagwcrltgdvlqppgts
Sequence, based on observed residues (ATOM records): (download)
>2vytB (B:)
ddfhweeylketgsisapsecfrqsqippvndfkvgmkleartsvciatvigitgarlrl
rldgsdnrndfwrlvdspdiqpvgtcekegdsemasatlfkkeppkpplnnfkvgmklea
idkknpylicpatigdvkgdevhitfdgwsgafdywckydsrdifpagwcrltgdvlqpp
gts