PDB entry 2vws

View 2vws on RCSB PDB site
Description: crystal structure of yfau, a metal ion dependent class II aldolase from escherichia coli k12
Class: lyase
Keywords: lyase, escherichia coli k-12 protein yfau, 2-keto-3-deoxy sugar aldolase, degradation of homoprotocatechuate, class II aldolase, (beta/alpha)8 barrel
Deposited on 2008-06-26, released 2008-09-09
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-31.
Experiment type: XRAY
Resolution: 1.39 Å
R-factor: 0.172
AEROSPACI score: 0.69 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: yfau, 2-keto-3-deoxy sugar aldolase
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2vwsa_
  • Chain 'B':
    Compound: yfau, 2-keto-3-deoxy sugar aldolase
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2vwsb_
  • Chain 'C':
    Compound: yfau, 2-keto-3-deoxy sugar aldolase
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2vwsc_
  • Heterogens: PO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2vwsA (A:)
    mnallsnpfkerlrkgevqiglwlssttaymaeiaatsgydwllidgehapntiqdlyhq
    lqavapyasqpvirpvegskplikqvldigaqtllipmvdtaeqarqvvsatryppyger
    gvgasvaraarwgrienymaqvndslcllvqvesktaldnldeildvegidgvfigpadl
    saslgypdnaghpevqriietsirriraagkaagflavapdmaqqclawganfvavgvdt
    mlysdaldqrlamfksgkngprikgsy
    

    Sequence, based on observed residues (ATOM records): (download)
    >2vwsA (A:)
    mnallsnpfkerlrkgevqiglwlssttaymaeiaatsgydwllidgehapntiqdlyhq
    lqavapyasqpvirpvegskplikqvldigaqtllipmvdtaeqarqvvsatryppyger
    gvgasvaraarwgrienymaqvndslcllvqvesktaldnldeildvegidgvfigpadl
    saslgypdnaghpevqriietsirriraagkaagflavapdmaqqclawganfvavgvdt
    mlysdaldqrlamfks
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2vwsB (B:)
    mnallsnpfkerlrkgevqiglwlssttaymaeiaatsgydwllidgehapntiqdlyhq
    lqavapyasqpvirpvegskplikqvldigaqtllipmvdtaeqarqvvsatryppyger
    gvgasvaraarwgrienymaqvndslcllvqvesktaldnldeildvegidgvfigpadl
    saslgypdnaghpevqriietsirriraagkaagflavapdmaqqclawganfvavgvdt
    mlysdaldqrlamfksgkngprikgsy
    

    Sequence, based on observed residues (ATOM records): (download)
    >2vwsB (B:)
    mnallsnpfkerlrkgevqiglwlssttaymaeiaatsgydwllidgehapntiqdlyhq
    lqavapyasqpvirpvegskplikqvldigaqtllipmvdtaeqarqvvsatryppyger
    gvgasvaraarwgrienymaqvndslcllvqvesktaldnldeildvegidgvfigpadl
    saslgypdnaghpevqriietsirriraagkaagflavapdmaqqclawganfvavgvdt
    mlysdaldqrlamfks
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2vwsC (C:)
    mnallsnpfkerlrkgevqiglwlssttaymaeiaatsgydwllidgehapntiqdlyhq
    lqavapyasqpvirpvegskplikqvldigaqtllipmvdtaeqarqvvsatryppyger
    gvgasvaraarwgrienymaqvndslcllvqvesktaldnldeildvegidgvfigpadl
    saslgypdnaghpevqriietsirriraagkaagflavapdmaqqclawganfvavgvdt
    mlysdaldqrlamfksgkngprikgsy
    

    Sequence, based on observed residues (ATOM records): (download)
    >2vwsC (C:)
    mnallsnpfkerlrkgevqiglwlssttaymaeiaatsgydwllidgehapntiqdlyhq
    lqavapyasqpvirpvegskplikqvldigaqtllipmvdtaeqarqvvsatryppyger
    gvgasvaraarwgrienymaqvndslcllvqvesktaldnldeildvegidgvfigpadl
    saslgypdnaghpevqriietsirriraagkaagflavapdmaqqclawganfvavgvdt
    mlysdaldqrlamfks