PDB entry 2vvo
View 2vvo on RCSB PDB site
Description: crystal structure of mycobacterium tuberculosis ribose-5-phosphate isomerase b in complex with alpha d-allose 6-phosphate
Class: isomerase
Keywords: rpib, rv2465c, isomerase, rare sugar, carbohydrate metabolism, pentose phosphate pathway
Deposited on
2008-06-10, released
2008-07-01
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.162
AEROSPACI score: 0.53
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: ribose-5-phosphate isomerase b
Species: Mycobacterium tuberculosis [TaxId:83332]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2vvoa_ - Chain 'B':
Compound: ribose-5-phosphate isomerase b
Species: Mycobacterium tuberculosis [TaxId:83332]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2vvob_ - Chain 'C':
Compound: ribose-5-phosphate isomerase b
Species: Mycobacterium tuberculosis [TaxId:83332]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2vvoc_ - Chain 'D':
Compound: ribose-5-phosphate isomerase b
Species: Mycobacterium tuberculosis [TaxId:83332]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2vvod_ - Chain 'E':
Compound: ribose-5-phosphate isomerase b
Species: Mycobacterium tuberculosis [TaxId:83332]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2vvoe_ - Heterogens: A6P, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2vvoA (A:)
msgmrvylgadhagyelkqriiehlkqtghepidcgalrydadddypafciaaatrtvad
pgslgivlggsgngeqiaankvpgarcalawsvqtaalarehnnaqligiggrmhtvaea
laivdafvttpwskaqrhqrridilaeyertheappvpgapa
Sequence, based on observed residues (ATOM records): (download)
>2vvoA (A:)
gmrvylgadhagyelkqriiehlkqtghepidcgalrydadddypafciaaatrtvadpg
slgivlggsgngeqiaankvpgarcalawsvqtaalarehnnaqligiggrmhtvaeala
ivdafvttpwskaqrhqrridilaeyertheappvp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2vvoB (B:)
msgmrvylgadhagyelkqriiehlkqtghepidcgalrydadddypafciaaatrtvad
pgslgivlggsgngeqiaankvpgarcalawsvqtaalarehnnaqligiggrmhtvaea
laivdafvttpwskaqrhqrridilaeyertheappvpgapa
Sequence, based on observed residues (ATOM records): (download)
>2vvoB (B:)
gmrvylgadhagyelkqriiehlkqtghepidcgalrydadddypafciaaatrtvadpg
slgivlggsgngeqiaankvpgarcalawsvqtaalarehnnaqligiggrmhtvaeala
ivdafvttpwskaqrhqrridilaeyertheappvp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2vvoC (C:)
msgmrvylgadhagyelkqriiehlkqtghepidcgalrydadddypafciaaatrtvad
pgslgivlggsgngeqiaankvpgarcalawsvqtaalarehnnaqligiggrmhtvaea
laivdafvttpwskaqrhqrridilaeyertheappvpgapa
Sequence, based on observed residues (ATOM records): (download)
>2vvoC (C:)
gmrvylgadhagyelkqriiehlkqtghepidcgalrydadddypafciaaatrtvadpg
slgivlggsgngeqiaankvpgarcalawsvqtaalarehnnaqligiggrmhtvaeala
ivdafvttpwskaqrhqrridilaeyertheappvpg
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2vvoD (D:)
msgmrvylgadhagyelkqriiehlkqtghepidcgalrydadddypafciaaatrtvad
pgslgivlggsgngeqiaankvpgarcalawsvqtaalarehnnaqligiggrmhtvaea
laivdafvttpwskaqrhqrridilaeyertheappvpgapa
Sequence, based on observed residues (ATOM records): (download)
>2vvoD (D:)
gmrvylgadhagyelkqriiehlkqtghepidcgalrydadddypafciaaatrtvadpg
slgivlggsgngeqiaankvpgarcalawsvqtaalarehnnaqligiggrmhtvaeala
ivdafvttpwskaqrhqrridilaeyertheappvpg
- Chain 'E':
Sequence, based on SEQRES records: (download)
>2vvoE (E:)
msgmrvylgadhagyelkqriiehlkqtghepidcgalrydadddypafciaaatrtvad
pgslgivlggsgngeqiaankvpgarcalawsvqtaalarehnnaqligiggrmhtvaea
laivdafvttpwskaqrhqrridilaeyertheappvpgapa
Sequence, based on observed residues (ATOM records): (download)
>2vvoE (E:)
gmrvylgadhagyelkqriiehlkqtghepidcgalrydadddypafciaaatrtvadpg
slgivlggsgngeqiaankvpgarcalawsvqtaalarehnnaqligiggrmhtvaeala
ivdafvttpwskaqrhqrridilaeyertheappvp