PDB entry 2vvi
View 2vvi on RCSB PDB site
Description: IrisFP fluorescent protein in its green form, trans conformation
Class: fluorescent protein
Keywords: photoactivation, photoconversion, fluorescent protein, optical highlighters, microspectrophotometry, eosfp, photochromism, photoswitching
Deposited on
2008-06-09, released
2008-11-11
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-10-23, with a file datestamp of
2019-10-18.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: green to red photoconvertible gpf-like protein eosfp
Species: LOBOPHYLLIA HEMPRICHII [TaxId:46758]
Database cross-references and differences (RAF-indexed):
- PDB 2VVI
- engineered mutation (174)
- engineered mutation (192)
- chromophore (65)
- Uniprot Q5S6Z9
Domains in SCOPe 2.08: d2vvia_ - Chain 'B':
Compound: green to red photoconvertible gpf-like protein eosfp
Species: LOBOPHYLLIA HEMPRICHII [TaxId:46758]
Database cross-references and differences (RAF-indexed):
- PDB 2VVI
- engineered mutation (174)
- engineered mutation (192)
- chromophore (65)
- Uniprot Q5S6Z9
Domains in SCOPe 2.08: d2vvib_ - Chain 'C':
Compound: green to red photoconvertible gpf-like protein eosfp
Species: LOBOPHYLLIA HEMPRICHII [TaxId:46758]
Database cross-references and differences (RAF-indexed):
- PDB 2VVI (0-1)
- engineered mutation (174)
- engineered mutation (192)
- chromophore (65)
- Uniprot Q5S6Z9 (2-End)
Domains in SCOPe 2.08: d2vvic1, d2vvic2 - Chain 'D':
Compound: green to red photoconvertible gpf-like protein eosfp
Species: LOBOPHYLLIA HEMPRICHII [TaxId:46758]
Database cross-references and differences (RAF-indexed):
- PDB 2VVI
- engineered mutation (174)
- engineered mutation (192)
- chromophore (65)
- Uniprot Q5S6Z9 (2-End)
Domains in SCOPe 2.08: d2vvid_ - Heterogens: SO4, SO3, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2vviA (A:)
hhmsaikpdmkinlrmegnvnghhfvidgdgtgkpfegkqsmdlevkeggplpfafdilt
tafhygnrvfaeypdhiqdyfkqsfpkgyswersltfedggiciarnditmegdtfynkv
rfhgvnfpangpvmqkktlkwepstekmyvrdgvltgditmalllegnahyrcdsrttyk
akekgvklpgyhlvdhcieilshdkdynkvklyehavahsglpdnarr
Sequence, based on observed residues (ATOM records): (download)
>2vviA (A:)
saikpdmkinlrmegnvnghhfvidgdgtgkpfegkqsmdlevkeggplpfafdilttaf
hygnrvfaeypdhiqdyfkqsfpkgyswersltfedggiciarnditmegdtfynkvrfh
gvnfpangpvmqkktlkwepstekmyvrdgvltgditmalllegnahyrcdsrttykake
kgvklpgyhlvdhcieilshdkdynkvklyehavahsglp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2vviB (B:)
hhmsaikpdmkinlrmegnvnghhfvidgdgtgkpfegkqsmdlevkeggplpfafdilt
tafhygnrvfaeypdhiqdyfkqsfpkgyswersltfedggiciarnditmegdtfynkv
rfhgvnfpangpvmqkktlkwepstekmyvrdgvltgditmalllegnahyrcdsrttyk
akekgvklpgyhlvdhcieilshdkdynkvklyehavahsglpdnarr
Sequence, based on observed residues (ATOM records): (download)
>2vviB (B:)
saikpdmkinlrmegnvnghhfvidgdgtgkpfegkqsmdlevkeggplpfafdilttaf
hygnrvfaeypdhiqdyfkqsfpkgyswersltfedggiciarnditmegdtfynkvrfh
gvnfpangpvmqkktlkwepstekmyvrdgvltgditmalllegnahyrcdsrttykake
kgvklpgyhlvdhcieilshdkdynkvklyehavahsglpdn
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2vviC (C:)
hhmsaikpdmkinlrmegnvnghhfvidgdgtgkpfegkqsmdlevkeggplpfafdilt
tafhygnrvfaeypdhiqdyfkqsfpkgyswersltfedggiciarnditmegdtfynkv
rfhgvnfpangpvmqkktlkwepstekmyvrdgvltgditmalllegnahyrcdsrttyk
akekgvklpgyhlvdhcieilshdkdynkvklyehavahsglpdnarr
Sequence, based on observed residues (ATOM records): (download)
>2vviC (C:)
hhmsaikpdmkinlrmegnvnghhfvidgdgtgkpfegkqsmdlevkeggplpfafdilt
tafhygnrvfaeypdhiqdyfkqsfpkgyswersltfedggiciarnditmegdtfynkv
rfhgvnfpangpvmqkktlkwepstekmyvrdgvltgditmalllegnahyrcdsrttyk
akekgvklpgyhlvdhcieilshdkdynkvklyehavahsglpdn
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2vviD (D:)
hhmsaikpdmkinlrmegnvnghhfvidgdgtgkpfegkqsmdlevkeggplpfafdilt
tafhygnrvfaeypdhiqdyfkqsfpkgyswersltfedggiciarnditmegdtfynkv
rfhgvnfpangpvmqkktlkwepstekmyvrdgvltgditmalllegnahyrcdsrttyk
akekgvklpgyhlvdhcieilshdkdynkvklyehavahsglpdnarr
Sequence, based on observed residues (ATOM records): (download)
>2vviD (D:)
msaikpdmkinlrmegnvnghhfvidgdgtgkpfegkqsmdlevkeggplpfafdiltta
fhygnrvfaeypdhiqdyfkqsfpkgyswersltfedggiciarnditmegdtfynkvrf
hgvnfpangpvmqkktlkwepstekmyvrdgvltgditmalllegnahyrcdsrttykak
ekgvklpgyhlvdhcieilshdkdynkvklyehavahsglpd