PDB entry 2vvd
View 2vvd on RCSB PDB site
Description: crystal structure of the receptor binding domain of the spike protein p1 from bacteriophage pm2
Deposited on
2008-06-06, released
2008-09-16
The last revision was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.26 Å
R-factor: 0.172
AEROSPACI score: 0.41
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: spike protein p1
Species: PSEUDOALTEROMONAS PHAGE PM2 [TaxId:10661]
Database cross-references and differences (RAF-indexed):
- Heterogens: CA, HOH
PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.
- Chain 'A':
Sequence, based on SEQRES records:
>2vvdA (A:)
vnywvsdeeirvfkeysarakyaqnegrtaleannvpffdidvppeldgvpfslkarvrh
kskgvdglgdytsisvkpafyitegdettdtlikytsygstgshsgydfddntldvmvtl
sagvhrvfpveteldydavqevqhdwydesfttfievysddplltvkgyaqilmert
Sequence, based on observed residues (ATOM records):
>2vvdA (A:)
deeirvfkeysarakyaqnegrtaleannvpffdidvppeldgvpfslkarvrhkskgvd
glgdytsisvkpafyitegdettdtlikytsygstgshsgydfddntldvmvtlsagvhr
vfpveteldydavqevqhdwydesfttfievysddplltvkg