PDB entry 2vub
View 2vub on RCSB PDB site
Description: ccdb, a topoisomerase poison from e. coli
Class: ccdb
Keywords: ccdb, topoisomerase poison, plasmid
Deposited on
1998-04-21, released
1998-06-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: 0.205
AEROSPACI score: 0.32
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: ccdb
Species: Escherichia coli [TaxId:562]
Gene: CCDB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2vuba_ - Chain 'B':
Compound: ccdb
Species: Escherichia coli [TaxId:562]
Gene: CCDB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2vubb_ - Chain 'C':
Compound: ccdb
Species: Escherichia coli [TaxId:562]
Gene: CCDB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2vubc_ - Chain 'D':
Compound: ccdb
Species: Escherichia coli [TaxId:562]
Gene: CCDB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2vubd_ - Chain 'E':
Compound: ccdb
Species: Escherichia coli [TaxId:562]
Gene: CCDB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2vube_ - Chain 'F':
Compound: ccdb
Species: Escherichia coli [TaxId:562]
Gene: CCDB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2vubf_ - Chain 'G':
Compound: ccdb
Species: Escherichia coli [TaxId:562]
Gene: CCDB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2vubg_ - Chain 'H':
Compound: ccdb
Species: Escherichia coli [TaxId:562]
Gene: CCDB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2vubh_ - Heterogens: CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2vubA (A:)
mqfkvytykresryrlfvdvqsdiidtpgrrmviplasarllsdkvsrelypvvhigdes
wrmmttdmasvpvsvigeevadlshrendiknainlmfwgi
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2vubB (B:)
mqfkvytykresryrlfvdvqsdiidtpgrrmviplasarllsdkvsrelypvvhigdes
wrmmttdmasvpvsvigeevadlshrendiknainlmfwgi
Sequence, based on observed residues (ATOM records): (download)
>2vubB (B:)
mqfkvytyyrlfvdvqsdiidtpgrrmviplasarllsdkvsrelypvvhigdeswrmmt
tdmasvpvsvigeevadlshrendiknainlmfwgi
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>2vubC (C:)
mqfkvytykresryrlfvdvqsdiidtpgrrmviplasarllsdkvsrelypvvhigdes
wrmmttdmasvpvsvigeevadlshrendiknainlmfwgi
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2vubD (D:)
mqfkvytykresryrlfvdvqsdiidtpgrrmviplasarllsdkvsrelypvvhigdes
wrmmttdmasvpvsvigeevadlshrendiknainlmfwgi
Sequence, based on observed residues (ATOM records): (download)
>2vubD (D:)
mqfkvytyyrlfvdvqsdiidtpgrrmviplasarllsdkvsrelypvvhigdeswrmmt
tdmasvpvsvigeevadlshrendiknainlmfwgi
- Chain 'E':
Sequence, based on SEQRES records: (download)
>2vubE (E:)
mqfkvytykresryrlfvdvqsdiidtpgrrmviplasarllsdkvsrelypvvhigdes
wrmmttdmasvpvsvigeevadlshrendiknainlmfwgi
Sequence, based on observed residues (ATOM records): (download)
>2vubE (E:)
mqfkvytyyrlfvdvqsdiidtpgrrmviplasarllsdkvsrelypvvhigdeswrmmt
tdmasvpvsvigeevadlshrendiknainlmfwgi
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>2vubF (F:)
mqfkvytykresryrlfvdvqsdiidtpgrrmviplasarllsdkvsrelypvvhigdes
wrmmttdmasvpvsvigeevadlshrendiknainlmfwgi
- Chain 'G':
Sequence, based on SEQRES records: (download)
>2vubG (G:)
mqfkvytykresryrlfvdvqsdiidtpgrrmviplasarllsdkvsrelypvvhigdes
wrmmttdmasvpvsvigeevadlshrendiknainlmfwgi
Sequence, based on observed residues (ATOM records): (download)
>2vubG (G:)
mqfkvytyyrlfvdvqsdiidtpgrrmviplasarllsdkvsrelypvvhigdeswrmmt
tdmasvpvsvigeevadlshrendiknainlmfwgi
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>2vubH (H:)
mqfkvytykresryrlfvdvqsdiidtpgrrmviplasarllsdkvsrelypvvhigdes
wrmmttdmasvpvsvigeevadlshrendiknainlmfwgi