PDB entry 2vtf

View 2vtf on RCSB PDB site
Description: x-ray crystal structure of the endo-beta-n-acetylglucosaminidase from arthrobacter protophormiae e173q mutant reveals a tim barrel catalytic domain and two ancillary domains
Deposited on 2008-05-14, released 2009-03-31
The last revision was dated 2011-07-13, with a file datestamp of 2011-05-31.
Experiment type: XRAY
Resolution: 1.79 Å
R-factor: 0.166
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: endo-beta-n-acetylglucosaminidase
    Species: ARTHROBACTER PROTOPHORMIAE [TaxId:37930]
    Database cross-references and differences (RAF-indexed):
    • PDB 2VTF
      • engineered mutation (47)
      • engineered mutation (55)
      • engineered mutation (177)
    • Uniprot Q9ZB22 (572-End)
  • Chain 'B':
    Compound: endo-beta-n-acetylglucosaminidase
    Species: ARTHROBACTER PROTOPHORMIAE [TaxId:37930]
    Database cross-references and differences (RAF-indexed):
    • PDB 2VTF
      • engineered mutation (47)
      • engineered mutation (55)
      • engineered mutation (177)
    • Uniprot Q9ZB22 (574-625)
  • Heterogens: B3P, PGE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vtfA (A:)
madigstyngplsshwfpeelaqwepdsdpdapfnrshvplepgrvadrvnanadtdahl
vslsalnrhtsgvpsqgapvfyentfsywhytdlmvywagsagegiivppsadvidashr
ngvpilgnvffpptvyggqlewleqmleqeedgsfpladkllevadyygfdgwfinqqte
gadegtaeamqaflvylqeqkpegmhimwydsmidtgaiawqnhltdrnkmylqngstrv
adsmflnfwwrdqrqsnelaqalgrspydlyagvdveargtstpvqweglfpegekahts
lglyrpdwafqssetmeafyekelqfwvgstgnpaetdgqsnwpgmahwfpakstatsvp
fvthfntgsgaqfsaegktvseqewnnrslqdvlptwrwiqhggdleatfsweeafeggs
slqwhgslaegehaqielyqtelpisegtsltwtfksehgndlnvgfrldgeedfryveg
eqresingwtqwtlpldafagqtitglafaaegnetglaefyigqlavgadsekpaapnv
nvrqydpdpsgiqlvwekqsnvhhyrvyketkhgkeligtsagdriyleglveeskqndv
rlhiealsetfvpsdarmidiksgsf

    Sequence, based on observed residues (ATOM records):
    >2vtfA (A:)
tyngplsshwfpeelaqwepdsdpdapfnrshvplepgrvadrvnanadtdahlvslsal
nrhtsgvpsqgapvfyentfsywhytdlmvywagsagegiivppsadvidashrngvpil
gnvffpptvyggqlewleqmleqeedgsfpladkllevadyygfdgwfinqqtegadegt
aeamqaflvylqeqkpegmhimwydsmidtgaiawqnhltdrnkmylqngstrvadsmfl
nfwwrdqrqsnelaqalgrspydlyagvdveargtstpvqweglfpegekahtslglyrp
dwafqssetmeafyekelqfwvgstgnpaetdgqsnwpgmahwfpakstatsvpfvthfn
tgsgaqfsaegktvseqewnnrslqdvlptwrwiqhggdleatfsweeafeggsslqwhg
slaegehaqielyqtelpisegtsltwtfksehgndlnvgfrldgeedfryvegeqresi
ngwtqwtlpldafagqtitglafaaegnetglaefyigqlavgadsekpaapnvnvrqyd
pdpsgiqlvwekqsnvhhyrvyketkhgkeligtsagdriyleglveeskqndvrlhiea
lsetfvpsdarmidik

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2vtfB (B:)
madigstyngplsshwfpeelaqwepdsdpdapfnrshvplepgrvadrvnanadtdahl
vslsalnrhtsgvpsqgapvfyentfsywhytdlmvywagsagegiivppsadvidashr
ngvpilgnvffpptvyggqlewleqmleqeedgsfpladkllevadyygfdgwfinqqte
gadegtaeamqaflvylqeqkpegmhimwydsmidtgaiawqnhltdrnkmylqngstrv
adsmflnfwwrdqrqsnelaqalgrspydlyagvdveargtstpvqweglfpegekahts
lglyrpdwafqssetmeafyekelqfwvgstgnpaetdgqsnwpgmahwfpakstatsvp
fvthfntgsgaqfsaegktvseqewnnrslqdvlptwrwiqhggdleatfsweeafeggs
slqwhgslaegehaqielyqtelpisegtsltwtfksehgndlnvgfrldgeedfryveg
eqresingwtqwtlpldafagqtitglafaaegnetglaefyigqlavgadsekpaapnv
nvrqydpdpsgiqlvwekqsnvhhyrvyketkhgkeligtsagdriyleglveeskqndv
rlhiealsetfvpsdarmidiksgsf

    Sequence, based on observed residues (ATOM records):
    >2vtfB (B:)
tyngplsshwfpeelaqwepdsdpdapfnrshvplepgrvadrvnanadtdahlvslsal
nrhtsgvpsqgapvfyentfsywhytdlmvywagsagegiivppsadvidashrngvpil
gnvffpptvyggqlewleqmleqeedgsfpladkllevadyygfdgwfinqqtegadegt
aeamqaflvylqeqkpegmhimwydsmidtgaiawqnhltdrnkmylqngstrvadsmfl
nfwwrdqrqsnelaqalgrspydlyagvdveargtstpvqweglfpegekahtslglyrp
dwafqssetmeafyekelqfwvgstgnpaetdgqsnwpgmahwfpakstatsvpfvthfn
tgsgaqfsaegktvseqewnnrslqdvlptwrwiqhggdleatfsweeafeggsslqwhg
slaegehaqielyqtelpisegtsltwtfksehgndlnvgfrldgeedfryvegeqresi
ngwtqwtlpldafagqtitglafaaegnetglaefyigqlavgadsekpaapnvnvrqyd
pdpsgiqlvwekqsnvhhyrvykekeligtsagdriyleglveeskqndvrlhiealset
fvpsdarmidiksgsf