PDB entry 2vsc

View 2vsc on RCSB PDB site
Description: structure of the immunoglobulin-superfamily ectodomain of human cd47
Deposited on 2008-04-22, released 2008-08-12
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: leukocyte surface antigen cd47
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08722 (0-End)
      • engineered mutation (14)
    • PDB 2VSC
  • Chain 'B':
    Compound: leukocyte surface antigen cd47
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08722 (0-End)
      • engineered mutation (14)
    • PDB 2VSC
  • Chain 'C':
    Compound: leukocyte surface antigen cd47
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08722 (0-End)
      • engineered mutation (14)
    • PDB 2VSC
  • Chain 'D':
    Compound: leukocyte surface antigen cd47
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08722 (0-End)
      • engineered mutation (14)
    • PDB 2VSC
  • Heterogens: NAG, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vscA (A:)
ellfnktksveftfgndtvvipcfvtnmeaqnttevyvkwkfkgrdiytfdgalnkstvp
tdfssakievsqllkgdaslkmdksdavshtgnytcevteltregetiielkyrvvswst
rhhhhhh

    Sequence, based on observed residues (ATOM records):
    >2vscA (A:)
ellfnktksveftfgndtvvipcfvtnmeaqnttevyvkwkfkgrdiytfdgalnkstvp
tdfssakievsqllkgdaslkmdksdavshtgnytcevteltregetiielkyrv

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2vscB (B:)
ellfnktksveftfgndtvvipcfvtnmeaqnttevyvkwkfkgrdiytfdgalnkstvp
tdfssakievsqllkgdaslkmdksdavshtgnytcevteltregetiielkyrvvswst
rhhhhhh

    Sequence, based on observed residues (ATOM records):
    >2vscB (B:)
ellfnktksveftfgndtvvipcfvtnmeaqnttevyvkwkfkgrdiytfdgalnkstvp
tdfssakievsqllkgdaslkmdksdavshtgnytcevteltregetiielkyrv

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2vscC (C:)
ellfnktksveftfgndtvvipcfvtnmeaqnttevyvkwkfkgrdiytfdgalnkstvp
tdfssakievsqllkgdaslkmdksdavshtgnytcevteltregetiielkyrvvswst
rhhhhhh

    Sequence, based on observed residues (ATOM records):
    >2vscC (C:)
ellfnktksveftfgndtvvipcfvtnmeaqnttevyvkwkfkgrdiytfdgalnkstvp
tdfssakievsqllkgdaslkmdksdavshtgnytcevteltregetiielkyrv

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2vscD (D:)
ellfnktksveftfgndtvvipcfvtnmeaqnttevyvkwkfkgrdiytfdgalnkstvp
tdfssakievsqllkgdaslkmdksdavshtgnytcevteltregetiielkyrvvswst
rhhhhhh

    Sequence, based on observed residues (ATOM records):
    >2vscD (D:)
ellfnktksveftfgndtvvipcfvtnmeaqnttevyvkwkfkgrdiytfdgalnkstvp
tdfssakievsqllkgdaslkmdksdavshtgnytcevteltregetiielkyrvv