PDB entry 2vs1

View 2vs1 on RCSB PDB site
Description: the crystal structure of pyrococcus abyssi trna (uracil-54, c5)- methyltransferase in complex with s-adenosyl-l-homocysteine
Deposited on 2008-04-17, released 2008-08-05
The last revision was dated 2017-07-12, with a file datestamp of 2017-07-07.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: uncharacterized RNA methyltransferase pyrab10780
    Species: Pyrococcus abyssi [TaxId:29292]
    Database cross-references and differences (RAF-indexed):
    • PDB 2VS1 (Start-19)
    • Uniprot Q9UZR7 (20-424)
  • Heterogens: SAH, PO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vs1A (A:)
mgsshhhhhhssglvprgshmrgvirklnddgfgvlkgilvpfsapgdeiiververvkk
rrvasqwklvrssplrvgprckafgkcggctlqhlnydyqlefkrkklkrilgfevevvp
spkifghrnridlaitkdgigfrergkwwkivdidecpvfgktsreaierlkefieeeki
svwnikkdegflrymvlregkfteevmvnfvtkegnlpdptnyfdfdsiywsvnrsksdv
sygdierfwgkefirerlddvdylihpnsffqtnsyqavnlvrkvselvegekildmysg
vgtfgiylakrgfnvkgfdsnefaiemarrnveinnvdaefevasdrevsvkgfdtvivd
ppraglhprlvkrlnrekpgvivyvscnpetfardvkmldyrideivaldmfphtphvel
vaklv

    Sequence, based on observed residues (ATOM records):
    >2vs1A (A:)
gshmrgvirklnddgfgvlkgilvpfsapgdeiiververvkkrrvasqwklvrssplrv
kcggctlqhlnydyqlefkrkklkrilgfevevvpspkifghrnridlaitkdgigfrek
wwkivdidecpvfgktsreaierlkefieeekisvwnikkdegflrymvlregkfteevm
vnfvtkegnlpdptnyfdfdsiywsvnrsksdvsygdierfwgkefirerlddvdylihp
nsffqtnsyqavnlvrkvselvegekildmysgvgtfgiylakrgfnvkgfdsnefaiem
arrnveinnvdaefevasdrevsvkgfdtvivdppraglhprlvkrlnrekpgvivyvsc
npetfardvkmldyrideivaldmfphtphvelvaklv