PDB entry 2vrp
View 2vrp on RCSB PDB site
Description: structure of rhodocytin
Class: sugar-binding protein
Keywords: c-type lectin-like, sugar-binding protein, lectin, clec-2, venom, aggretin
Deposited on
2008-04-09, released
2008-07-08
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-31.
Experiment type: XRAY
Resolution: 2.41 Å
R-factor: 0.204
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Aggretin alpha chain
Species: Calloselasma rhodostoma [TaxId:8717]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2vrpa_ - Chain 'B':
Compound: Aggretin beta chain
Species: Calloselasma rhodostoma [TaxId:8717]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2vrpb_ - Heterogens: NA, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2vrpA (A:)
gledcdfgwspydqhcyqafneqktwdeaekfcraqengahlasiesngeadfvswlisq
kdeladedyvwiglraqnkeqqcssewsdgssvsyenlidlhtkkcgalekltgfrkwvn
yyceqmhafvckllpy
Sequence, based on observed residues (ATOM records): (download)
>2vrpA (A:)
dcdfgwspydqhcyqafneqktwdeaekfcraqengahlasiesngeadfvswlisqkde
ladedyvwiglraqnkeqqcssewsdgssvsyenlidlhtkkcgalekltgfrkwvnyyc
eqmhafvckllpy
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2vrpB (B:)
dcpsgwssyeghcykpfnepknwadaerfcklqpkhshlvsfqsaeeadfvvkltrprlk
anlvwmglsniwhgcnwqwsdgarlnykdwqeqseclafrgvhtewlnmdcsstcsfvck
fka