PDB entry 2vri

View 2vri on RCSB PDB site
Description: Structure of the NSP3 X-domain of human coronavirus NL63
Class: viral protein
Keywords: RNA replication, nucleotide-binding, endonuclease, macro domain, viral protein, ATP-binding, exonuclease, RNA-binding, transferase, nsp3, adrp, zinc, membrane, helicase, protease, metal-binding, transmembrane, thiol protease, nuclease, hydrolase, cytoplasm, hcov-nl63, zinc-finger, nucleotidyltransferase, ribosomal frameshifting, RNA-directed RNA polymerase
Deposited on 2008-04-08, released 2009-06-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: non-structural protein 3
  Species: HUMAN CORONAVIRUS NL63 [TaxId:277944]
  Database cross-references and differences (RAF-indexed):
  • PDB 2VRI (0-9)
  • Uniprot P0C6U6 (10-End)
  Domains in SCOPe 2.08: d2vria_
• Heterogens: EDO, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence, based on SEQRES records: (download)
  

  >2vriA (A:)
  kagsaaapftkpfavyknvkfylgdishlvncvsfdfvvnaanenllhgggvaraidilt
  egqlqslskdyissngplkvgagvmlecekfnvfnvvgprtgkhehsllveaynsilfen
  giplmpllscgifgvrienslkalfscdinkplqvfvyssneeqavlkfldgld
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >2vriA (A:)
  kagsaaapftkpfavyknvkfylgdishlvncvsfdfvvnaanenllhgggvaraidilt
  egqlqslskdyissngplkvgagvmlecekfnvfnvvgprtgkhehsllveaynsilfen
  giplmpllscgifgvrienslkalfscdinkplqvfvyssneeqavlkfldgl