PDB entry 2vrh
View 2vrh on RCSB PDB site
Description: Structure of the E. coli trigger factor bound to a translating ribosome
Class: ribosome
Keywords: ribosome, trigger factor, ribosomal protein, ribonucleoprotein, co-translational protein folding, rotamase, chaperone, isomerase, cell cycle, RNA-binding, rRNA-binding, cell division, ribosome-nascent chain complex
Deposited on
2008-04-07, released
2008-06-17
The last revision prior to the SCOPe 2.06 freeze date was dated
2013-08-07, with a file datestamp of
2013-08-02.
Experiment type: EM
Resolution: 19 Å
R-factor: N/A
AEROSPACI score: -0.15
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Trigger Factor
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2vrha1, d2vrha2, d2vrha3 - Chain 'B':
Compound: 50S ribosomal protein L23
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2vrhb1 - Chain 'C':
Compound: 50S ribosomal protein L24
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2vrhc1 - Chain 'D':
Compound: 50S ribosomal protein L29
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2vrhd1
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2vrhA (A:)
mqvsvettqglgrrvtitiaadsietavkselvnvakkvridgfrkgkvpmnivaqryga
svrqdvlgdlmsrnfidaiikekinpagaptyvpgeyklgedftysvefevypevelqgl
eaievekpivevtdadvdgmldtlrkqqatwkekdgaveaedrvtidftgsvdgeefegg
kasdfvlamgqgrmipgfedgikghkageeftidvtfpeeyhaenlkgkaakfainlkkv
eerelpeltaefikrfgvedgsveglraevrknmerelksairnrvksqaieglvkandi
dvpaalidseidvlrrqaaqrfggnekqalelprelfeeqakrrvvvglllgevirtnel
kadeervkglieemasayedpkeviefysknkelmdnmrnvaleeqaveavlakakvtek
ettfnelmnqqa
Sequence, based on observed residues (ATOM records): (download)
>2vrhA (A:)
mqvsvettqglgrrvtitiaadsietavkselvnvakkvridgfrkgkvpmnivaqryga
svrqdvlgdlmsrnfidaiikekinpagaptyvpgeyklgedftysvefevypevelqgl
eaievekpivevtdadvdgmldtlrkqqatwkekdgaveaedrvtidftgsvdgeefegg
kasdfvlamgqgrmipgfedgikghkageeftidvtfpeeyhaenlkgkaakfainlkkv
eerelpeltaefikrfgvedgsveglraevrknmerelksairnrvksqaieglvkandi
dvpaalidseidvlrrqaaqrfggnekqalelprelfeeqakrrvvvglllgevirtnel
kadeervkglieemasayedpkeviefysknkelmdnmrnvaleeqaveavlakakvtek
ettfnelmnqq
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2vrhB (B:)
mireerllkvlraphvsekastameksntivlkvakdatkaeikaavqklfevevevvnt
lvvkgkvkrhgqrigrrsdwkkayvtlkegqnldfvggae
Sequence, based on observed residues (ATOM records): (download)
>2vrhB (B:)
mireerllkvlraphvsekastameksntivlkvakdatkaeikaavqklfevevevvnt
lvvkgkvkrhgqrigrrsdwkkayvtlkegqnldfvgga
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2vrhC (C:)
aakirrddevivltgkdkgkrgkvknvlssgkviveginlvkkhqkpvpalnqpggivek
eaaiqvsnvaifnaatgkadrvgfrfedgkkvrffksnsetik
Sequence, based on observed residues (ATOM records): (download)
>2vrhC (C:)
aakirrddevivltgkdkgkrgkvknvlssgkviveginlvkkhqkpvpalnqpggivek
eaaiqvsnvaifnaatgkadrvgfrfedgkkvrffksnseti
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>2vrhD (D:)
mkakelreksveelntellnllreqfnlrmqaasgqlqqshllkqvrrdvarvktllnek
aga