PDB entry 2vr3

View 2vr3 on RCSB PDB site
Description: structural and biochemical characterization of fibrinogen binding to clfa from staphylocccus aureus
Deposited on 2008-03-25, released 2009-05-19
The last revision was dated 2009-05-19, with a file datestamp of 2009-05-15.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.21264
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: clumping factor a
    Species: Staphylococcus aureus [TaxId:1280]
    Database cross-references and differences (RAF-indexed):
    • PDB 2VR3
      • engineered mutation (110)
      • engineered mutation (324)
    • Uniprot Q2G015 (Start-328)
  • Chain 'B':
    Compound: clumping factor a
    Species: Staphylococcus aureus [TaxId:1280]
    Database cross-references and differences (RAF-indexed):
    • PDB 2VR3
      • engineered mutation (110)
      • engineered mutation (324)
    • Uniprot Q2G015
  • Chain 'C':
    Compound: fibrinogen gamma-chain
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02679 (Start-12)
      • engineered mutation (11)
  • Chain 'D':
    Compound: fibrinogen gamma-chain
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02679 (0-12)
      • engineered mutation (11)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vr3A (A:)
mrgshhhhhhgsgtditnqltnvtvgidsgttvyphqagyvklnygfsvpnsavkgdtfk
itvpkelnlngvtstakvppimagdqvlangvidsdgnviytftdyvntkcdvkatltmp
ayidpenvkktgnvtlatgigsttanktvlvdyekygkfynlsikgtidqidktnntyrq
tiyvnpsgdnviapvltgnlkpntdsnalidqqntsikvykvdnaadlsesyfvnpenfe
dvtnsvnitfpnpnqykvefntpddqittpyivvvnghidpnskgdlalrstlygynsni
iwrsmswdnevafnngsgsgdgidcpvvp

    Sequence, based on observed residues (ATOM records):
    >2vr3A (A:)
tditnqltnvtvgidsgttvyphqagyvklnygfsvpnsavkgdtfkitvpkelnlngvt
stakvppimavlangvidsdgnviytftdyvntkcdvkatltmpayidpenvkktgnvtl
atgigsttanktvlvdyekygkfynlsikgtidqidktnntyrqtiyvnpsgdnviapvl
tgnlkpntdsnalidqqntsikvykvdnaadlsesyfvnpedvtnsvnitfpnpnqykve
fpddqittpyivvvnghidpnskgdlalrstlygynsniiwrsmswdnevafnngsgsgd
gidcpvvp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2vr3B (B:)
mrgshhhhhhgsgtditnqltnvtvgidsgttvyphqagyvklnygfsvpnsavkgdtfk
itvpkelnlngvtstakvppimagdqvlangvidsdgnviytftdyvntkcdvkatltmp
ayidpenvkktgnvtlatgigsttanktvlvdyekygkfynlsikgtidqidktnntyrq
tiyvnpsgdnviapvltgnlkpntdsnalidqqntsikvykvdnaadlsesyfvnpenfe
dvtnsvnitfpnpnqykvefntpddqittpyivvvnghidpnskgdlalrstlygynsni
iwrsmswdnevafnngsgsgdgidcpvvp

    Sequence, based on observed residues (ATOM records):
    >2vr3B (B:)
tditnqltnvtvgidsgttvyphqagyvklnygfsvpnsavkgdtfkitvpkelnlngvt
stakvppimagdqvlangvidsdgnviytftdyvntkcdvkatltmpayidpenvkktgn
vtlatgigsttanktvlvdyekygkfynlsikgtidqidktnntyrqtiyvnpsgdnvia
pvltgnlkpntdsnalidqqntsikvykvnaadlsesyfvnpenfedvtnsvnitfpnpn
qykvefpddqittpyivvvnghidpnskgdlalrstlygynsniiwrsmswdnevafnng
sgsgdgidcpv

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2vr3C (C:)
qhhlggakqagav

    Sequence, based on observed residues (ATOM records):
    >2vr3C (C:)
hhlggakqagav

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >2vr3D (D:)
qhhlggakqagav