PDB entry 2vqm

View 2vqm on RCSB PDB site
Description: structure of hdac4 catalytic domain bound to a hydroxamic acid inhbitor
Deposited on 2008-03-17, released 2008-07-08
The last revision was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.221
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Histone deacetylase 4
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: K, HA3, ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vqmA (A:)
    gamtkprfttglvydtlmlkhqctcgsssshpehagriqsiwsrlqetglrgkcecirgr
    katleelqtvhseahtllygtnplnrqkldskkllgslasvfvrlpcggvgvdsdtiwne
    vhsagaarlavgcvvelvfkvatgelkngfavvrppghhaeestpmgfcyfnsvavaakl
    lqqrlsvskilivdwdvhhgngtqqafysdpsvlymslhryddgnffpgsgapdevgtgp
    gvgfnvnmaftggldppmgdaeylaafrtvvmpiasefapdvvlvssgfdaveghptplg
    gynlsarcfgyltkqlmglaggrivlalegghdltaicdaseacvsallgneldplpekv
    lqqrpnanavrsmekvmeihskywrclqrttstagrslieaqtceneeaetvt
    

    Sequence, based on observed residues (ATOM records):
    >2vqmA (A:)
    prfttglvydtlmlkhqctcghagriqsiwsrlqetglrgkcecirgrkatleelqtvhs
    eahtllygtnplnrqkkllgslasvfvrlpcggvgvdsdtiwnevhsagaarlavgcvve
    lvfkvatgelkngfavvrppghhaeestpmgfcyfnsvavaakllqqrlsvskilivdwd
    vhhgngtqqafysdpsvlymslhryddgnffpgsgapdevgtgpgvgfnvnmaftggldp
    pmgdaeylaafrtvvmpiasefapdvvlvssgfdaveghptplggynlsarcfgyltkql
    mglaggrivlalegghdltaicdaseacvsallgneldplpekvlqqrpnanavrsmekv
    meihskywrclqrttstagrslieaqtcene