PDB entry 2vqj

View 2vqj on RCSB PDB site
Description: structure of hdac4 catalytic domain bound to a trifluoromethylketone inhbitor
Deposited on 2008-03-17, released 2008-07-08
The last revision was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.228
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Histone deacetylase 4
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: DIO, K, SO4, TFG, ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2vqjA (A:)
gamtkprfttglvydtlmlkhqctcgsssshpehagriqsiwsrlqetglrgkcecirgr
katleelqtvhseahtllygtnplnrqkldskkllgslasvfvrlpcggvgvdsdtiwne
vhsagaarlavgcvvelvfkvatgelkngfavvrppghhaeestpmgfcyfnsvavaakl
lqqrlsvskilivdwdvhhgngtqqafysdpsvlymslhryddgnffpgsgapdevgtgp
gvgfnvnmaftggldppmgdaeylaafrtvvmpiasefapdvvlvssgfdaveghptplg
gynlsarcfgyltkqlmglaggrivlalegghdltaicdaseacvsallgneldplpekv
lqqrpnanavrsmekvmeihskywrclqrttstagrslieaqtceneeaetvt

    Sequence, based on observed residues (ATOM records):
    >2vqjA (A:)
prfttglvydtlmlkhqctcgsssshpehagriqsiwsrlqetglrgkcecirgrkatle
elqtvhseahtllygtnplnrqkldskkllgslasvfvrlpcggvgvdsdtiwnevhsag
aarlavgcvvelvfkvatgelkngfavvrppghhaeestpmgfcyfnsvavaakllqqrl
svskilivdwdvhhgngtqqafysdpsvlymslhryddgnffpgsgapdevgtgpgvgfn
vnmaftggldppmgdaeylaafrtvvmpiasefapdvvlvssgfdaveghptplggynls
arcfgyltkqlmglaggrivlalegghdltaicdaseacvsallgneldplpekvlqqrp
nanavrsmekvmeihskywrclqrttstagrslieaqtcene